RNA–Protein interactions for RNA: ENST00000519306.1

AC027541.1-201, humanhuman

TSL 3 BASIC

Gene AC027541.1, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027541.1-201ENST00000519306 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
AC027541.1-201ENST00000519306 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
AC027541.1-201ENST00000519306 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
AC027541.1-201ENST00000519306 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
AC027541.1-201ENST00000519306 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
AC027541.1-201ENST00000519306 FOXD1Q16676 465 aa19.02■□□□□ 0.64
AC027541.1-201ENST00000519306 MSH5O43196 834 aa18.02■□□□□ 0.48
AC027541.1-201ENST00000519306 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
AC027541.1-201ENST00000519306 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AC027541.1-201ENST00000519306 ADRA2BP18089 450 aa17.04■□□□□ 0.32
AC027541.1-201ENST00000519306 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
AC027541.1-201ENST00000519306 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
AC027541.1-201ENST00000519306 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
AC027541.1-201ENST00000519306 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
AC027541.1-201ENST00000519306 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
AC027541.1-201ENST00000519306 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
AC027541.1-201ENST00000519306 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
AC027541.1-201ENST00000519306 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
AC027541.1-201ENST00000519306 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
AC027541.1-201ENST00000519306 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
AC027541.1-201ENST00000519306 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
AC027541.1-201ENST00000519306 POTEHQ6S545 545 aa14.82□□□□□ -0.04
AC027541.1-201ENST00000519306 ABCC9O60706 1549 aa14.8□□□□□ -0.04
AC027541.1-201ENST00000519306 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
AC027541.1-201ENST00000519306 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
AC027541.1-201ENST00000519306 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
AC027541.1-201ENST00000519306 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
AC027541.1-201ENST00000519306 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
AC027541.1-201ENST00000519306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
AC027541.1-201ENST00000519306 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
AC027541.1-201ENST00000519306 NACADO15069 1562 aa14.21□□□□□ -0.14
AC027541.1-201ENST00000519306 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
AC027541.1-201ENST00000519306 DSG3P32926 999 aa14.1□□□□□ -0.15
AC027541.1-201ENST00000519306 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
AC027541.1-201ENST00000519306 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
AC027541.1-201ENST00000519306 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
AC027541.1-201ENST00000519306 CAPN15O75808 1086 aa13.94□□□□□ -0.18
AC027541.1-201ENST00000519306 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
AC027541.1-201ENST00000519306 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC027541.1-201ENST00000519306 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
AC027541.1-201ENST00000519306 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
AC027541.1-201ENST00000519306 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
AC027541.1-201ENST00000519306 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
AC027541.1-201ENST00000519306 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
AC027541.1-201ENST00000519306 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
AC027541.1-201ENST00000519306 ABCB7O75027 752 aa13.57□□□□□ -0.24
AC027541.1-201ENST00000519306 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
AC027541.1-201ENST00000519306 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
AC027541.1-201ENST00000519306 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
AC027541.1-201ENST00000519306 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
AC027541.1-201ENST00000519306 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
AC027541.1-201ENST00000519306 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
AC027541.1-201ENST00000519306 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
AC027541.1-201ENST00000519306 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
AC027541.1-201ENST00000519306 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
AC027541.1-201ENST00000519306 APLP2Q06481 763 aa13.27□□□□□ -0.29
AC027541.1-201ENST00000519306 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
AC027541.1-201ENST00000519306 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
AC027541.1-201ENST00000519306 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
AC027541.1-201ENST00000519306 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
AC027541.1-201ENST00000519306 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
AC027541.1-201ENST00000519306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 KCNA4P22459 653 aa13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
AC027541.1-201ENST00000519306 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
AC027541.1-201ENST00000519306 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
AC027541.1-201ENST00000519306 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
AC027541.1-201ENST00000519306 HAX1O00165 279 aa13□□□□□ -0.33
AC027541.1-201ENST00000519306 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
AC027541.1-201ENST00000519306 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
AC027541.1-201ENST00000519306 POLA2Q14181 598 aa12.98□□□□□ -0.33
AC027541.1-201ENST00000519306 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
AC027541.1-201ENST00000519306 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
AC027541.1-201ENST00000519306 EVX2Q03828 476 aa12.88□□□□□ -0.35
AC027541.1-201ENST00000519306 WIZO95785 1651 aa12.86□□□□□ -0.35
AC027541.1-201ENST00000519306 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
AC027541.1-201ENST00000519306 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
AC027541.1-201ENST00000519306 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
AC027541.1-201ENST00000519306 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
AC027541.1-201ENST00000519306 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
AC027541.1-201ENST00000519306 NESP48681 1621 aa12.76□□□□□ -0.37
AC027541.1-201ENST00000519306 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
AC027541.1-201ENST00000519306 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
AC027541.1-201ENST00000519306 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
AC027541.1-201ENST00000519306 CUX2O14529 1486 aa12.67□□□□□ -0.38
AC027541.1-201ENST00000519306 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
AC027541.1-201ENST00000519306 LHX8Q68G74 356 aa12.64□□□□□ -0.39
AC027541.1-201ENST00000519306 CFTRP13569 1480 aa12.63□□□□□ -0.39
AC027541.1-201ENST00000519306 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
AC027541.1-201ENST00000519306 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
AC027541.1-201ENST00000519306 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
AC027541.1-201ENST00000519306 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
AC027541.1-201ENST00000519306 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
AC027541.1-201ENST00000519306 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
AC027541.1-201ENST00000519306 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
AC027541.1-201ENST00000519306 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms