RNA–Protein interactions for RNA: ENST00000519001.1

VIRMA-204, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-204ENST00000519001 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
VIRMA-204ENST00000519001 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
VIRMA-204ENST00000519001 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
VIRMA-204ENST00000519001 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
VIRMA-204ENST00000519001 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
VIRMA-204ENST00000519001 ABCC9O60706 1549 aa12.14□□□□□ -0.47
VIRMA-204ENST00000519001 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.48
VIRMA-204ENST00000519001 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
VIRMA-204ENST00000519001 DCAF1Q9Y4B6 1507 aa11.98□□□□□ -0.49
VIRMA-204ENST00000519001 NACADO15069 1562 aa11.91□□□□□ -0.5
VIRMA-204ENST00000519001 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
VIRMA-204ENST00000519001 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
VIRMA-204ENST00000519001 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
VIRMA-204ENST00000519001 SENP3Q9H4L4 574 aaPredicted RBP11.65□□□□□ -0.54
VIRMA-204ENST00000519001 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
VIRMA-204ENST00000519001 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
VIRMA-204ENST00000519001 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
VIRMA-204ENST00000519001 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
VIRMA-204ENST00000519001 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
VIRMA-204ENST00000519001 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
VIRMA-204ENST00000519001 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
VIRMA-204ENST00000519001 CECR2Q9BXF3 1484 aa11.13□□□□□ -0.63
VIRMA-204ENST00000519001 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
VIRMA-204ENST00000519001 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
VIRMA-204ENST00000519001 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
VIRMA-204ENST00000519001 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
VIRMA-204ENST00000519001 CC2D2AQ9P2K1 1620 aa11.04□□□□□ -0.64
VIRMA-204ENST00000519001 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
VIRMA-204ENST00000519001 NCAPD3P42695 1498 aa11□□□□□ -0.65
VIRMA-204ENST00000519001 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
VIRMA-204ENST00000519001 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
VIRMA-204ENST00000519001 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
VIRMA-204ENST00000519001 HMGXB3Q12766 1538 aa10.95□□□□□ -0.66
VIRMA-204ENST00000519001 WIZO95785 1651 aa10.89□□□□□ -0.67
VIRMA-204ENST00000519001 ADRA2BP18089 450 aa10.89□□□□□ -0.67
VIRMA-204ENST00000519001 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
VIRMA-204ENST00000519001 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
VIRMA-204ENST00000519001 FOXD1Q16676 465 aa10.78□□□□□ -0.68
VIRMA-204ENST00000519001 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
VIRMA-204ENST00000519001 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
VIRMA-204ENST00000519001 SUPT5HO00267 1087 aaKnown RBP10.7□□□□□ -0.7
VIRMA-204ENST00000519001 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.7
VIRMA-204ENST00000519001 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.7
VIRMA-204ENST00000519001 KCNA4P22459 653 aa10.65□□□□□ -0.7
VIRMA-204ENST00000519001 CFTRP13569 1480 aa10.65□□□□□ -0.7
VIRMA-204ENST00000519001 NESP48681 1621 aa10.57□□□□□ -0.72
VIRMA-204ENST00000519001 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
VIRMA-204ENST00000519001 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
VIRMA-204ENST00000519001 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
VIRMA-204ENST00000519001 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
VIRMA-204ENST00000519001 CEP164Q9UPV0 1460 aa10.46□□□□□ -0.74
VIRMA-204ENST00000519001 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.74
VIRMA-204ENST00000519001 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
VIRMA-204ENST00000519001 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
VIRMA-204ENST00000519001 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
VIRMA-204ENST00000519001 WDR62O43379 1518 aa10.42□□□□□ -0.74
VIRMA-204ENST00000519001 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
VIRMA-204ENST00000519001 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
VIRMA-204ENST00000519001 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
VIRMA-204ENST00000519001 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
VIRMA-204ENST00000519001 CUX2O14529 1486 aa10.36□□□□□ -0.75
VIRMA-204ENST00000519001 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
VIRMA-204ENST00000519001 CUX1P39880 1505 aa10.34□□□□□ -0.75
VIRMA-204ENST00000519001 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
VIRMA-204ENST00000519001 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
VIRMA-204ENST00000519001 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
VIRMA-204ENST00000519001 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
VIRMA-204ENST00000519001 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
VIRMA-204ENST00000519001 PIAS4Q8N2W9 510 aaPredicted RBP10.28□□□□□ -0.76
VIRMA-204ENST00000519001 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
VIRMA-204ENST00000519001 IFT140Q96RY7 1462 aa10.26□□□□□ -0.77
VIRMA-204ENST00000519001 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
VIRMA-204ENST00000519001 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
VIRMA-204ENST00000519001 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
VIRMA-204ENST00000519001 SOGA1O94964 1423 aa10.23□□□□□ -0.77
VIRMA-204ENST00000519001 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
VIRMA-204ENST00000519001 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
VIRMA-204ENST00000519001 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
VIRMA-204ENST00000519001 ABCA5Q8WWZ7 1642 aa10.16□□□□□ -0.78
VIRMA-204ENST00000519001 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
VIRMA-204ENST00000519001 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
VIRMA-204ENST00000519001 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
VIRMA-204ENST00000519001 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
VIRMA-204ENST00000519001 GAPVD1Q14C86 1478 aa10.12□□□□□ -0.79
VIRMA-204ENST00000519001 KIF27Q86VH2 1401 aa10.12□□□□□ -0.79
VIRMA-204ENST00000519001 TDRD9Q8NDG6 1382 aaKnown RBP10.12□□□□□ -0.79
VIRMA-204ENST00000519001 AQRO60306 1485 aaKnown RBP eCLIP10.11□□□□□ -0.793e-6■■■□□ 18.4
VIRMA-204ENST00000519001 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
VIRMA-204ENST00000519001 GRIN2BQ13224 1484 aa10.1□□□□□ -0.79
VIRMA-204ENST00000519001 EEA1Q15075 1411 aa10.08□□□□□ -0.8
VIRMA-204ENST00000519001 IGF1RP08069 1367 aa10.08□□□□□ -0.8
VIRMA-204ENST00000519001 MAGI1Q96QZ7 1491 aaPredicted RBP10.08□□□□□ -0.8
VIRMA-204ENST00000519001 MSH5O43196 834 aa10.07□□□□□ -0.8
VIRMA-204ENST00000519001 PBRM1Q86U86 1689 aa10.06□□□□□ -0.8
VIRMA-204ENST00000519001 RUSC2Q8N2Y8 1516 aa10.05□□□□□ -0.8
VIRMA-204ENST00000519001 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
VIRMA-204ENST00000519001 NPM3O75607 178 aaKnown RBP10.03□□□□□ -0.8
VIRMA-204ENST00000519001 ADAMTS12P58397 1594 aa10.03□□□□□ -0.8
VIRMA-204ENST00000519001 SNAPC4Q5SXM2 1469 aa10.03□□□□□ -0.8
VIRMA-204ENST00000519001 CUL7Q14999 1698 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms