RNA–Protein interactions for RNA: ENST00000518517.5

TPD52-208, Transcript of tumor protein D52, humanhuman

TSL 4

Gene TPD52, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPD52-208ENST00000518517 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
TPD52-208ENST00000518517 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
TPD52-208ENST00000518517 ABCC9O60706 1549 aa22.86■■□□□ 1.25
TPD52-208ENST00000518517 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
TPD52-208ENST00000518517 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
TPD52-208ENST00000518517 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
TPD52-208ENST00000518517 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
TPD52-208ENST00000518517 NACADO15069 1562 aa21.27■■□□□ 1
TPD52-208ENST00000518517 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
TPD52-208ENST00000518517 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
TPD52-208ENST00000518517 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
TPD52-208ENST00000518517 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
TPD52-208ENST00000518517 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
TPD52-208ENST00000518517 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
TPD52-208ENST00000518517 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
TPD52-208ENST00000518517 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
TPD52-208ENST00000518517 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
TPD52-208ENST00000518517 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
TPD52-208ENST00000518517 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
TPD52-208ENST00000518517 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
TPD52-208ENST00000518517 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
TPD52-208ENST00000518517 CUX2O14529 1486 aa19.94■□□□□ 0.78
TPD52-208ENST00000518517 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
TPD52-208ENST00000518517 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
TPD52-208ENST00000518517 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
TPD52-208ENST00000518517 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
TPD52-208ENST00000518517 NESP48681 1621 aa19.46■□□□□ 0.71
TPD52-208ENST00000518517 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
TPD52-208ENST00000518517 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
TPD52-208ENST00000518517 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
TPD52-208ENST00000518517 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
TPD52-208ENST00000518517 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
TPD52-208ENST00000518517 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
TPD52-208ENST00000518517 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
TPD52-208ENST00000518517 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
TPD52-208ENST00000518517 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
TPD52-208ENST00000518517 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
TPD52-208ENST00000518517 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
TPD52-208ENST00000518517 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
TPD52-208ENST00000518517 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
TPD52-208ENST00000518517 WDR62O43379 1518 aa19■□□□□ 0.63
TPD52-208ENST00000518517 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
TPD52-208ENST00000518517 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
TPD52-208ENST00000518517 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
TPD52-208ENST00000518517 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
TPD52-208ENST00000518517 RIMBP3CA6NJZ7 1639 aa18.79■□□□□ 0.6
TPD52-208ENST00000518517 RIMBP3BA6NNM3 1639 aa18.79■□□□□ 0.6
TPD52-208ENST00000518517 RIMBP3Q9UFD9 1639 aa18.79■□□□□ 0.6
TPD52-208ENST00000518517 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
TPD52-208ENST00000518517 WIZO95785 1651 aa18.75■□□□□ 0.59
TPD52-208ENST00000518517 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
TPD52-208ENST00000518517 CFTRP13569 1480 aa18.63■□□□□ 0.57
TPD52-208ENST00000518517 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
TPD52-208ENST00000518517 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
TPD52-208ENST00000518517 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
TPD52-208ENST00000518517 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
TPD52-208ENST00000518517 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
TPD52-208ENST00000518517 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
TPD52-208ENST00000518517 CHD1O14646 1710 aa18.46■□□□□ 0.55
TPD52-208ENST00000518517 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
TPD52-208ENST00000518517 FOXD1Q16676 465 aa18.44■□□□□ 0.54
TPD52-208ENST00000518517 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
TPD52-208ENST00000518517 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
TPD52-208ENST00000518517 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
TPD52-208ENST00000518517 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
TPD52-208ENST00000518517 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
TPD52-208ENST00000518517 FBLN2P98095 1184 aa18.32■□□□□ 0.52
TPD52-208ENST00000518517 DNMBPQ6XZF7 1577 aa18.28■□□□□ 0.52
TPD52-208ENST00000518517 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
TPD52-208ENST00000518517 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
TPD52-208ENST00000518517 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
TPD52-208ENST00000518517 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
TPD52-208ENST00000518517 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
TPD52-208ENST00000518517 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
TPD52-208ENST00000518517 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
TPD52-208ENST00000518517 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
TPD52-208ENST00000518517 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
TPD52-208ENST00000518517 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
TPD52-208ENST00000518517 SOGA1O94964 1423 aa18.06■□□□□ 0.48
TPD52-208ENST00000518517 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
TPD52-208ENST00000518517 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
TPD52-208ENST00000518517 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
TPD52-208ENST00000518517 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
TPD52-208ENST00000518517 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
TPD52-208ENST00000518517 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
TPD52-208ENST00000518517 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
TPD52-208ENST00000518517 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
TPD52-208ENST00000518517 CUX1P39880 1505 aa17.83■□□□□ 0.45
TPD52-208ENST00000518517 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
TPD52-208ENST00000518517 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
TPD52-208ENST00000518517 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
TPD52-208ENST00000518517 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
TPD52-208ENST00000518517 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
TPD52-208ENST00000518517 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
TPD52-208ENST00000518517 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
TPD52-208ENST00000518517 NUP160Q12769 1436 aa17.64■□□□□ 0.42
TPD52-208ENST00000518517 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
TPD52-208ENST00000518517 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
TPD52-208ENST00000518517 FAM69CQ0P6D2 419 aa17.6■□□□□ 0.41
TPD52-208ENST00000518517 KDM6BO15054 1643 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms