RNA–Protein interactions for RNA: ENST00000518260.1

AC110011.1-201, humanhuman

TSL 3 BASIC

Gene AC110011.1, Length 582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC110011.1-201ENST00000518260 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
AC110011.1-201ENST00000518260 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
AC110011.1-201ENST00000518260 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
AC110011.1-201ENST00000518260 ABCC9O60706 1549 aa13.89□□□□□ -0.19
AC110011.1-201ENST00000518260 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
AC110011.1-201ENST00000518260 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
AC110011.1-201ENST00000518260 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
AC110011.1-201ENST00000518260 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
AC110011.1-201ENST00000518260 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
AC110011.1-201ENST00000518260 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
AC110011.1-201ENST00000518260 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
AC110011.1-201ENST00000518260 NACADO15069 1562 aa12.84□□□□□ -0.35
AC110011.1-201ENST00000518260 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
AC110011.1-201ENST00000518260 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
AC110011.1-201ENST00000518260 CC2D2AQ9P2K1 1620 aa12.52□□□□□ -0.4
AC110011.1-201ENST00000518260 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
AC110011.1-201ENST00000518260 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
AC110011.1-201ENST00000518260 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
AC110011.1-201ENST00000518260 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
AC110011.1-201ENST00000518260 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
AC110011.1-201ENST00000518260 FOXD1Q16676 465 aa12.4□□□□□ -0.42
AC110011.1-201ENST00000518260 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
AC110011.1-201ENST00000518260 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
AC110011.1-201ENST00000518260 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
AC110011.1-201ENST00000518260 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
AC110011.1-201ENST00000518260 CUX2O14529 1486 aa11.92□□□□□ -0.5
AC110011.1-201ENST00000518260 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
AC110011.1-201ENST00000518260 NESP48681 1621 aa11.91□□□□□ -0.5
AC110011.1-201ENST00000518260 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
AC110011.1-201ENST00000518260 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
AC110011.1-201ENST00000518260 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
AC110011.1-201ENST00000518260 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
AC110011.1-201ENST00000518260 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
AC110011.1-201ENST00000518260 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
AC110011.1-201ENST00000518260 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
AC110011.1-201ENST00000518260 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
AC110011.1-201ENST00000518260 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
AC110011.1-201ENST00000518260 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
AC110011.1-201ENST00000518260 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
AC110011.1-201ENST00000518260 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
AC110011.1-201ENST00000518260 PPP6R1Q9UPN7 881 aa11.64□□□□□ -0.55
AC110011.1-201ENST00000518260 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
AC110011.1-201ENST00000518260 MSH5O43196 834 aa11.63□□□□□ -0.55
AC110011.1-201ENST00000518260 ADRA2BP18089 450 aa11.63□□□□□ -0.55
AC110011.1-201ENST00000518260 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
AC110011.1-201ENST00000518260 WIZO95785 1651 aa11.55□□□□□ -0.56
AC110011.1-201ENST00000518260 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
AC110011.1-201ENST00000518260 MRC2Q9UBG0 1479 aa11.51□□□□□ -0.57
AC110011.1-201ENST00000518260 WDR62O43379 1518 aa11.51□□□□□ -0.57
AC110011.1-201ENST00000518260 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
AC110011.1-201ENST00000518260 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
AC110011.1-201ENST00000518260 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
AC110011.1-201ENST00000518260 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
AC110011.1-201ENST00000518260 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
AC110011.1-201ENST00000518260 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
AC110011.1-201ENST00000518260 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
AC110011.1-201ENST00000518260 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
AC110011.1-201ENST00000518260 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
AC110011.1-201ENST00000518260 CFTRP13569 1480 aa11.33□□□□□ -0.6
AC110011.1-201ENST00000518260 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
AC110011.1-201ENST00000518260 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
AC110011.1-201ENST00000518260 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
AC110011.1-201ENST00000518260 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.61
AC110011.1-201ENST00000518260 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
AC110011.1-201ENST00000518260 CHD1O14646 1710 aa11.22□□□□□ -0.61
AC110011.1-201ENST00000518260 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.61
AC110011.1-201ENST00000518260 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
AC110011.1-201ENST00000518260 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
AC110011.1-201ENST00000518260 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
AC110011.1-201ENST00000518260 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
AC110011.1-201ENST00000518260 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
AC110011.1-201ENST00000518260 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.63
AC110011.1-201ENST00000518260 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
AC110011.1-201ENST00000518260 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
AC110011.1-201ENST00000518260 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
AC110011.1-201ENST00000518260 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
AC110011.1-201ENST00000518260 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
AC110011.1-201ENST00000518260 FBLN2P98095 1184 aa11.07□□□□□ -0.64
AC110011.1-201ENST00000518260 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
AC110011.1-201ENST00000518260 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
AC110011.1-201ENST00000518260 CLASP1Q7Z460 1538 aa11.02□□□□□ -0.65
AC110011.1-201ENST00000518260 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
AC110011.1-201ENST00000518260 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
AC110011.1-201ENST00000518260 SOGA1O94964 1423 aa10.97□□□□□ -0.65
AC110011.1-201ENST00000518260 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
AC110011.1-201ENST00000518260 CUX1P39880 1505 aa10.96□□□□□ -0.65
AC110011.1-201ENST00000518260 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
AC110011.1-201ENST00000518260 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
AC110011.1-201ENST00000518260 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
AC110011.1-201ENST00000518260 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
AC110011.1-201ENST00000518260 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
AC110011.1-201ENST00000518260 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
AC110011.1-201ENST00000518260 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
AC110011.1-201ENST00000518260 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
AC110011.1-201ENST00000518260 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
AC110011.1-201ENST00000518260 ABCA5Q8WWZ7 1642 aa10.85□□□□□ -0.67
AC110011.1-201ENST00000518260 CEP170Q5SW79 1584 aa10.82□□□□□ -0.68
AC110011.1-201ENST00000518260 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
AC110011.1-201ENST00000518260 KIF13AQ9H1H9 1805 aa10.81□□□□□ -0.68
AC110011.1-201ENST00000518260 ADAMTS12P58397 1594 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms