RNA–Protein interactions for RNA: ENST00000516232.1

RNA5SP228-201, Transcript of RNA, 5S ribosomal pseudogene 228, humanhuman

BASIC

Gene RNA5SP228, Length 133 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP228-201ENST00000516232 NISCHQ9Y2I1 1504 aa13.06□□□□□ -0.32
RNA5SP228-201ENST00000516232 ABCC9O60706 1549 aa12.82□□□□□ -0.36
RNA5SP228-201ENST00000516232 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
RNA5SP228-201ENST00000516232 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
RNA5SP228-201ENST00000516232 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
RNA5SP228-201ENST00000516232 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
RNA5SP228-201ENST00000516232 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNA5SP228-201ENST00000516232 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
RNA5SP228-201ENST00000516232 UNC13AQ9UPW8 1703 aa11.59□□□□□ -0.55
RNA5SP228-201ENST00000516232 NACADO15069 1562 aa11.54□□□□□ -0.56
RNA5SP228-201ENST00000516232 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.57
RNA5SP228-201ENST00000516232 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.57
RNA5SP228-201ENST00000516232 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
RNA5SP228-201ENST00000516232 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
RNA5SP228-201ENST00000516232 EIF4G1Q04637 1599 aaKnown RBP11.31□□□□□ -0.6
RNA5SP228-201ENST00000516232 CUX2O14529 1486 aa11.31□□□□□ -0.6
RNA5SP228-201ENST00000516232 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
RNA5SP228-201ENST00000516232 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
RNA5SP228-201ENST00000516232 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
RNA5SP228-201ENST00000516232 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
RNA5SP228-201ENST00000516232 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
RNA5SP228-201ENST00000516232 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
RNA5SP228-201ENST00000516232 NESP48681 1621 aa10.8□□□□□ -0.68
RNA5SP228-201ENST00000516232 SMARCA2P51531 1590 aa10.74□□□□□ -0.69
RNA5SP228-201ENST00000516232 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
RNA5SP228-201ENST00000516232 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
RNA5SP228-201ENST00000516232 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
RNA5SP228-201ENST00000516232 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
RNA5SP228-201ENST00000516232 KIF21AQ7Z4S6 1674 aa10.65□□□□□ -0.7
RNA5SP228-201ENST00000516232 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.7
RNA5SP228-201ENST00000516232 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.7
RNA5SP228-201ENST00000516232 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.7
RNA5SP228-201ENST00000516232 CHIC1Q5VXU3 224 aa10.64□□□□□ -0.71
RNA5SP228-201ENST00000516232 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
RNA5SP228-201ENST00000516232 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
RNA5SP228-201ENST00000516232 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
RNA5SP228-201ENST00000516232 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
RNA5SP228-201ENST00000516232 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
RNA5SP228-201ENST00000516232 ILDR1Q86SU0 546 aaPredicted RBP10.53□□□□□ -0.72
RNA5SP228-201ENST00000516232 ARHGEF11O15085 1522 aa10.53□□□□□ -0.72
RNA5SP228-201ENST00000516232 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
RNA5SP228-201ENST00000516232 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
RNA5SP228-201ENST00000516232 WDR62O43379 1518 aa10.5□□□□□ -0.73
RNA5SP228-201ENST00000516232 CYB5RLQ6IPT4 315 aa10.46□□□□□ -0.73
RNA5SP228-201ENST00000516232 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
RNA5SP228-201ENST00000516232 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
RNA5SP228-201ENST00000516232 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
RNA5SP228-201ENST00000516232 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
RNA5SP228-201ENST00000516232 CEP164Q9UPV0 1460 aa10.31□□□□□ -0.76
RNA5SP228-201ENST00000516232 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
RNA5SP228-201ENST00000516232 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
RNA5SP228-201ENST00000516232 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
RNA5SP228-201ENST00000516232 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
RNA5SP228-201ENST00000516232 ZNF608Q9ULD9 1512 aaPredicted RBP10.2□□□□□ -0.78
RNA5SP228-201ENST00000516232 CHD1O14646 1710 aa10.19□□□□□ -0.78
RNA5SP228-201ENST00000516232 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
RNA5SP228-201ENST00000516232 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
RNA5SP228-201ENST00000516232 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
RNA5SP228-201ENST00000516232 FBLN2P98095 1184 aa10.09□□□□□ -0.79
RNA5SP228-201ENST00000516232 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
RNA5SP228-201ENST00000516232 KDM4FA0A1W2PPD8 638 aa10.05□□□□□ -0.8
RNA5SP228-201ENST00000516232 CFTRP13569 1480 aa10.04□□□□□ -0.8
RNA5SP228-201ENST00000516232 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.8
RNA5SP228-201ENST00000516232 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
RNA5SP228-201ENST00000516232 AQRO60306 1485 aaKnown RBP eCLIP10□□□□□ -0.81
RNA5SP228-201ENST00000516232 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
RNA5SP228-201ENST00000516232 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
RNA5SP228-201ENST00000516232 HECW2Q9P2P5 1572 aa9.97□□□□□ -0.81
RNA5SP228-201ENST00000516232 KIF13AQ9H1H9 1805 aa9.96□□□□□ -0.81
RNA5SP228-201ENST00000516232 FBXO41Q8TF61 875 aa9.96□□□□□ -0.82
RNA5SP228-201ENST00000516232 SYNJ1O43426 1573 aa9.96□□□□□ -0.82
RNA5SP228-201ENST00000516232 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
RNA5SP228-201ENST00000516232 WIZO95785 1651 aa9.93□□□□□ -0.82
RNA5SP228-201ENST00000516232 PRDM2Q13029 1718 aa9.92□□□□□ -0.82
RNA5SP228-201ENST00000516232 TARBP1Q13395 1621 aaKnown RBP9.92□□□□□ -0.82
RNA5SP228-201ENST00000516232 SNAPC4Q5SXM2 1469 aa9.91□□□□□ -0.82
RNA5SP228-201ENST00000516232 KDM6BO15054 1643 aa9.89□□□□□ -0.83
RNA5SP228-201ENST00000516232 SOCS7O14512 581 aa9.88□□□□□ -0.83
RNA5SP228-201ENST00000516232 CHMP7Q8WUX9 453 aaPredicted RBP9.86□□□□□ -0.83
RNA5SP228-201ENST00000516232 ADGRL1O94910 1474 aa9.85□□□□□ -0.83
RNA5SP228-201ENST00000516232 DNMBPQ6XZF7 1577 aa9.85□□□□□ -0.83
RNA5SP228-201ENST00000516232 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
RNA5SP228-201ENST00000516232 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
RNA5SP228-201ENST00000516232 SYNJ2O15056 1496 aa9.83□□□□□ -0.84
RNA5SP228-201ENST00000516232 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
RNA5SP228-201ENST00000516232 TDRD9Q8NDG6 1382 aaKnown RBP9.81□□□□□ -0.84
RNA5SP228-201ENST00000516232 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
RNA5SP228-201ENST00000516232 MAGI1Q96QZ7 1491 aaPredicted RBP9.8□□□□□ -0.84
RNA5SP228-201ENST00000516232 FAM69CQ0P6D2 419 aa9.8□□□□□ -0.84
RNA5SP228-201ENST00000516232 RAD54L2Q9Y4B4 1467 aa9.79□□□□□ -0.84
RNA5SP228-201ENST00000516232 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
RNA5SP228-201ENST00000516232 DISP3Q9P2K9 1392 aa9.77□□□□□ -0.84
RNA5SP228-201ENST00000516232 DIP2BQ9P265 1576 aa9.77□□□□□ -0.85
RNA5SP228-201ENST00000516232 TSPOAP1O95153 1857 aa9.75□□□□□ -0.85
RNA5SP228-201ENST00000516232 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
RNA5SP228-201ENST00000516232 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
RNA5SP228-201ENST00000516232 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
RNA5SP228-201ENST00000516232 CEP170Q5SW79 1584 aa9.73□□□□□ -0.85
RNA5SP228-201ENST00000516232 SOGA1O94964 1423 aa9.71□□□□□ -0.86
RNA5SP228-201ENST00000516232 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms