RNA–Protein interactions for RNA: ENST00000515755.1

SRP19-207, Transcript of signal recognition particle 19, humanhuman

TSL 2

Gene SRP19, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-207ENST00000515755 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
SRP19-207ENST00000515755 ABCC9O60706 1549 aa30.86■■■□□ 2.53
SRP19-207ENST00000515755 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
SRP19-207ENST00000515755 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
SRP19-207ENST00000515755 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
SRP19-207ENST00000515755 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
SRP19-207ENST00000515755 NACADO15069 1562 aa28.54■■■□□ 2.16
SRP19-207ENST00000515755 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
SRP19-207ENST00000515755 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
SRP19-207ENST00000515755 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
SRP19-207ENST00000515755 DNAJC5Q9H3Z4 198 aa27.92■■■□□ 2.06
SRP19-207ENST00000515755 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
SRP19-207ENST00000515755 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
SRP19-207ENST00000515755 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
SRP19-207ENST00000515755 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
SRP19-207ENST00000515755 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
SRP19-207ENST00000515755 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
SRP19-207ENST00000515755 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
SRP19-207ENST00000515755 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
SRP19-207ENST00000515755 CUX2O14529 1486 aa26.9■■□□□ 1.9
SRP19-207ENST00000515755 ERCC6Q03468 1493 aa26.69■■□□□ 1.86
SRP19-207ENST00000515755 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
SRP19-207ENST00000515755 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
SRP19-207ENST00000515755 NESP48681 1621 aa26.27■■□□□ 1.8
SRP19-207ENST00000515755 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
SRP19-207ENST00000515755 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
SRP19-207ENST00000515755 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
SRP19-207ENST00000515755 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
SRP19-207ENST00000515755 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
SRP19-207ENST00000515755 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
SRP19-207ENST00000515755 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
SRP19-207ENST00000515755 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
SRP19-207ENST00000515755 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
SRP19-207ENST00000515755 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
SRP19-207ENST00000515755 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
SRP19-207ENST00000515755 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
SRP19-207ENST00000515755 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
SRP19-207ENST00000515755 WDR62O43379 1518 aa25.58■■□□□ 1.68
SRP19-207ENST00000515755 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
SRP19-207ENST00000515755 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
SRP19-207ENST00000515755 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
SRP19-207ENST00000515755 RIMBP3CA6NJZ7 1639 aa25.32■■□□□ 1.64
SRP19-207ENST00000515755 RIMBP3BA6NNM3 1639 aa25.32■■□□□ 1.64
SRP19-207ENST00000515755 RIMBP3Q9UFD9 1639 aa25.32■■□□□ 1.64
SRP19-207ENST00000515755 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
SRP19-207ENST00000515755 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
SRP19-207ENST00000515755 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
SRP19-207ENST00000515755 WIZO95785 1651 aa25.1■■□□□ 1.61
SRP19-207ENST00000515755 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
SRP19-207ENST00000515755 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
SRP19-207ENST00000515755 CFTRP13569 1480 aa25.06■■□□□ 1.6
SRP19-207ENST00000515755 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
SRP19-207ENST00000515755 ZNF608Q9ULD9 1512 aaPredicted RBP24.95■■□□□ 1.58
SRP19-207ENST00000515755 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
SRP19-207ENST00000515755 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
SRP19-207ENST00000515755 CHD1O14646 1710 aa24.74■■□□□ 1.55
SRP19-207ENST00000515755 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
SRP19-207ENST00000515755 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
SRP19-207ENST00000515755 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
SRP19-207ENST00000515755 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
SRP19-207ENST00000515755 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
SRP19-207ENST00000515755 FBLN2P98095 1184 aa24.67■■□□□ 1.54
SRP19-207ENST00000515755 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.533e-6■□□□□ 9.4
SRP19-207ENST00000515755 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
SRP19-207ENST00000515755 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
SRP19-207ENST00000515755 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
SRP19-207ENST00000515755 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
SRP19-207ENST00000515755 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
SRP19-207ENST00000515755 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
SRP19-207ENST00000515755 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
SRP19-207ENST00000515755 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
SRP19-207ENST00000515755 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
SRP19-207ENST00000515755 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
SRP19-207ENST00000515755 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
SRP19-207ENST00000515755 SOGA1O94964 1423 aa24.27■■□□□ 1.48
SRP19-207ENST00000515755 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
SRP19-207ENST00000515755 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
SRP19-207ENST00000515755 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
SRP19-207ENST00000515755 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
SRP19-207ENST00000515755 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
SRP19-207ENST00000515755 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
SRP19-207ENST00000515755 ILDR1Q86SU0 546 aaPredicted RBP24.01■■□□□ 1.43
SRP19-207ENST00000515755 ERCC6L2Q5T890 1561 aa24■■□□□ 1.43
SRP19-207ENST00000515755 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
SRP19-207ENST00000515755 CUX1P39880 1505 aa23.94■■□□□ 1.42
SRP19-207ENST00000515755 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
SRP19-207ENST00000515755 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
SRP19-207ENST00000515755 KDM4FA0A1W2PPD8 638 aa23.84■■□□□ 1.41
SRP19-207ENST00000515755 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
SRP19-207ENST00000515755 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
SRP19-207ENST00000515755 FAM69CQ0P6D2 419 aa23.77■■□□□ 1.4
SRP19-207ENST00000515755 NUP160Q12769 1436 aa23.76■■□□□ 1.39
SRP19-207ENST00000515755 ABCA10Q8WWZ4 1543 aa23.76■■□□□ 1.39
SRP19-207ENST00000515755 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
SRP19-207ENST00000515755 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
SRP19-207ENST00000515755 ADAMTS12P58397 1594 aa23.68■■□□□ 1.38
SRP19-207ENST00000515755 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
SRP19-207ENST00000515755 KDM6BO15054 1643 aa23.63■■□□□ 1.37
SRP19-207ENST00000515755 NPM1P06748 294 aaKnown RBP eCLIP23.63■■□□□ 1.37
SRP19-207ENST00000515755 DIP2BQ9P265 1576 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms