RNA–Protein interactions for RNA: ENST00000515333.1

PGM3-213, Transcript of phosphoglucomutase 3, humanhuman

TSL 2

Gene PGM3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-213ENST00000515333 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
PGM3-213ENST00000515333 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
PGM3-213ENST00000515333 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PGM3-213ENST00000515333 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
PGM3-213ENST00000515333 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
PGM3-213ENST00000515333 NACADO15069 1562 aa27.38■■□□□ 1.97
PGM3-213ENST00000515333 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
PGM3-213ENST00000515333 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
PGM3-213ENST00000515333 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
PGM3-213ENST00000515333 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
PGM3-213ENST00000515333 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
PGM3-213ENST00000515333 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
PGM3-213ENST00000515333 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
PGM3-213ENST00000515333 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
PGM3-213ENST00000515333 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
PGM3-213ENST00000515333 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
PGM3-213ENST00000515333 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
PGM3-213ENST00000515333 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
PGM3-213ENST00000515333 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
PGM3-213ENST00000515333 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
PGM3-213ENST00000515333 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
PGM3-213ENST00000515333 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
PGM3-213ENST00000515333 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
PGM3-213ENST00000515333 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
PGM3-213ENST00000515333 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
PGM3-213ENST00000515333 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
PGM3-213ENST00000515333 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
PGM3-213ENST00000515333 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
PGM3-213ENST00000515333 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
PGM3-213ENST00000515333 CUX2O14529 1486 aa24.86■■□□□ 1.57
PGM3-213ENST00000515333 WIZO95785 1651 aa24.83■■□□□ 1.57
PGM3-213ENST00000515333 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
PGM3-213ENST00000515333 NESP48681 1621 aa24.79■■□□□ 1.56
PGM3-213ENST00000515333 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
PGM3-213ENST00000515333 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
PGM3-213ENST00000515333 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
PGM3-213ENST00000515333 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
PGM3-213ENST00000515333 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
PGM3-213ENST00000515333 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
PGM3-213ENST00000515333 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
PGM3-213ENST00000515333 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
PGM3-213ENST00000515333 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
PGM3-213ENST00000515333 CFTRP13569 1480 aa24.32■■□□□ 1.48
PGM3-213ENST00000515333 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
PGM3-213ENST00000515333 WDR62O43379 1518 aa24.27■■□□□ 1.48
PGM3-213ENST00000515333 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
PGM3-213ENST00000515333 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
PGM3-213ENST00000515333 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
PGM3-213ENST00000515333 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
PGM3-213ENST00000515333 PRDM2Q13029 1718 aa24.08■■□□□ 1.45
PGM3-213ENST00000515333 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
PGM3-213ENST00000515333 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
PGM3-213ENST00000515333 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
PGM3-213ENST00000515333 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
PGM3-213ENST00000515333 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
PGM3-213ENST00000515333 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
PGM3-213ENST00000515333 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
PGM3-213ENST00000515333 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
PGM3-213ENST00000515333 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
PGM3-213ENST00000515333 CUX1P39880 1505 aa23.59■■□□□ 1.37
PGM3-213ENST00000515333 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
PGM3-213ENST00000515333 EIF4G3O43432 1585 aaKnown RBP23.58■■□□□ 1.37
PGM3-213ENST00000515333 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
PGM3-213ENST00000515333 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
PGM3-213ENST00000515333 SOGA1O94964 1423 aa23.51■■□□□ 1.35
PGM3-213ENST00000515333 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.359e-6■□□□□ 10.2
PGM3-213ENST00000515333 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
PGM3-213ENST00000515333 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
PGM3-213ENST00000515333 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
PGM3-213ENST00000515333 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
PGM3-213ENST00000515333 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
PGM3-213ENST00000515333 CHD1O14646 1710 aa23.39■■□□□ 1.33
PGM3-213ENST00000515333 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
PGM3-213ENST00000515333 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
PGM3-213ENST00000515333 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
PGM3-213ENST00000515333 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
PGM3-213ENST00000515333 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
PGM3-213ENST00000515333 FBLN2P98095 1184 aa23.29■■□□□ 1.32
PGM3-213ENST00000515333 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
PGM3-213ENST00000515333 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
PGM3-213ENST00000515333 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
PGM3-213ENST00000515333 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
PGM3-213ENST00000515333 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
PGM3-213ENST00000515333 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
PGM3-213ENST00000515333 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
PGM3-213ENST00000515333 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
PGM3-213ENST00000515333 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
PGM3-213ENST00000515333 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
PGM3-213ENST00000515333 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
PGM3-213ENST00000515333 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
PGM3-213ENST00000515333 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
PGM3-213ENST00000515333 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
PGM3-213ENST00000515333 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
PGM3-213ENST00000515333 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
PGM3-213ENST00000515333 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
PGM3-213ENST00000515333 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
PGM3-213ENST00000515333 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PGM3-213ENST00000515333 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
PGM3-213ENST00000515333 FOXD1Q16676 465 aa22.84■■□□□ 1.25
PGM3-213ENST00000515333 IGF1RP08069 1367 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms