RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 NISCHQ9Y2I1 1504 aa13.78□□□□□ -0.2
LDB2-216ENST00000515064 ABCC9O60706 1549 aa12.58□□□□□ -0.4
LDB2-216ENST00000515064 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
LDB2-216ENST00000515064 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
LDB2-216ENST00000515064 MYT1Q01538 1121 aa12.26□□□□□ -0.45
LDB2-216ENST00000515064 HRCP23327 699 aa12.17□□□□□ -0.46
LDB2-216ENST00000515064 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
LDB2-216ENST00000515064 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
LDB2-216ENST00000515064 PPARGC1BQ86YN6 1023 aaKnown RBP11.82□□□□□ -0.52
LDB2-216ENST00000515064 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
LDB2-216ENST00000515064 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
LDB2-216ENST00000515064 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
LDB2-216ENST00000515064 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
LDB2-216ENST00000515064 NACADO15069 1562 aa11.66□□□□□ -0.54
LDB2-216ENST00000515064 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
LDB2-216ENST00000515064 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
LDB2-216ENST00000515064 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.56
LDB2-216ENST00000515064 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
LDB2-216ENST00000515064 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
LDB2-216ENST00000515064 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
LDB2-216ENST00000515064 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
LDB2-216ENST00000515064 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
LDB2-216ENST00000515064 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
LDB2-216ENST00000515064 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
LDB2-216ENST00000515064 BCL11AQ9H165 835 aa11.28□□□□□ -0.6
LDB2-216ENST00000515064 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
LDB2-216ENST00000515064 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
LDB2-216ENST00000515064 CENPBP07199 599 aaPredicted RBP11.26□□□□□ -0.61
LDB2-216ENST00000515064 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
LDB2-216ENST00000515064 EIF4G1Q04637 1599 aaKnown RBP11.23□□□□□ -0.61
LDB2-216ENST00000515064 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
LDB2-216ENST00000515064 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
LDB2-216ENST00000515064 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
LDB2-216ENST00000515064 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
LDB2-216ENST00000515064 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
LDB2-216ENST00000515064 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
LDB2-216ENST00000515064 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
LDB2-216ENST00000515064 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
LDB2-216ENST00000515064 DIEXFQ68CQ4 756 aaKnown RBP10.91□□□□□ -0.66
LDB2-216ENST00000515064 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
LDB2-216ENST00000515064 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
LDB2-216ENST00000515064 APLP2Q06481 763 aa10.85□□□□□ -0.67
LDB2-216ENST00000515064 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
LDB2-216ENST00000515064 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
LDB2-216ENST00000515064 NESP48681 1621 aa10.81□□□□□ -0.68
LDB2-216ENST00000515064 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
LDB2-216ENST00000515064 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
LDB2-216ENST00000515064 YTHDC1Q96MU7 727 aaKnown RBP10.79□□□□□ -0.68
LDB2-216ENST00000515064 SMARCA4P51532 1647 aa10.77□□□□□ -0.69
LDB2-216ENST00000515064 SMARCA2P51531 1590 aa10.71□□□□□ -0.7
LDB2-216ENST00000515064 CUX2O14529 1486 aa10.71□□□□□ -0.7
LDB2-216ENST00000515064 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
LDB2-216ENST00000515064 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
LDB2-216ENST00000515064 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
LDB2-216ENST00000515064 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
LDB2-216ENST00000515064 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
LDB2-216ENST00000515064 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
LDB2-216ENST00000515064 AEBP2Q6ZN18 517 aaPredicted RBP10.68□□□□□ -0.7
LDB2-216ENST00000515064 BAZ1AQ9NRL2 1556 aaPredicted RBP10.67□□□□□ -0.7
LDB2-216ENST00000515064 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
LDB2-216ENST00000515064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
LDB2-216ENST00000515064 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
LDB2-216ENST00000515064 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
LDB2-216ENST00000515064 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
LDB2-216ENST00000515064 PEG3Q9GZU2 1588 aa10.59□□□□□ -0.71
LDB2-216ENST00000515064 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
LDB2-216ENST00000515064 WIZO95785 1651 aa10.56□□□□□ -0.72
LDB2-216ENST00000515064 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
LDB2-216ENST00000515064 MIER1Q8N108 512 aa10.55□□□□□ -0.72
LDB2-216ENST00000515064 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
LDB2-216ENST00000515064 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
LDB2-216ENST00000515064 ANO8Q9HCE9 1232 aaPredicted RBP10.48□□□□□ -0.73
LDB2-216ENST00000515064 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
LDB2-216ENST00000515064 MRC2Q9UBG0 1479 aa10.44□□□□□ -0.74
LDB2-216ENST00000515064 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
LDB2-216ENST00000515064 WDR62O43379 1518 aa10.41□□□□□ -0.74
LDB2-216ENST00000515064 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
LDB2-216ENST00000515064 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
LDB2-216ENST00000515064 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
LDB2-216ENST00000515064 UBE2Q2Q8WVN8 375 aa10.38□□□□□ -0.75
LDB2-216ENST00000515064 CFTRP13569 1480 aa10.36□□□□□ -0.75
LDB2-216ENST00000515064 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
LDB2-216ENST00000515064 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
LDB2-216ENST00000515064 ERICH6BQ5W0A0 696 aa10.35□□□□□ -0.75
LDB2-216ENST00000515064 BCANQ96GW7 911 aa10.33□□□□□ -0.76
LDB2-216ENST00000515064 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
LDB2-216ENST00000515064 SALL2Q9Y467 1007 aaPredicted RBP10.32□□□□□ -0.76
LDB2-216ENST00000515064 MSH5O43196 834 aa10.31□□□□□ -0.76
LDB2-216ENST00000515064 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
LDB2-216ENST00000515064 ZNF608Q9ULD9 1512 aaPredicted RBP10.29□□□□□ -0.76
LDB2-216ENST00000515064 CCDC136Q96JN2 1154 aa10.28□□□□□ -0.76
LDB2-216ENST00000515064 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
LDB2-216ENST00000515064 EIF5BO60841 1220 aaKnown RBP10.28□□□□□ -0.76
LDB2-216ENST00000515064 EHMT2Q96KQ7 1210 aa10.28□□□□□ -0.76
LDB2-216ENST00000515064 FANCIQ9NVI1 1328 aa10.26□□□□□ -0.77
LDB2-216ENST00000515064 FKBP8Q14318 412 aa10.25□□□□□ -0.77
LDB2-216ENST00000515064 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
LDB2-216ENST00000515064 NEFLP07196 543 aa10.23□□□□□ -0.77
LDB2-216ENST00000515064 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
LDB2-216ENST00000515064 PRDM2Q13029 1718 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms