RNA–Protein interactions for RNA: ENST00000514872.1

SEL1L3-213, Transcript of SEL1L family member 3, humanhuman

TSL 4

Gene SEL1L3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-213ENST00000514872 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
SEL1L3-213ENST00000514872 ABCC9O60706 1549 aa27.99■■■□□ 2.07
SEL1L3-213ENST00000514872 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
SEL1L3-213ENST00000514872 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
SEL1L3-213ENST00000514872 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
SEL1L3-213ENST00000514872 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
SEL1L3-213ENST00000514872 NACADO15069 1562 aa25.75■■□□□ 1.71
SEL1L3-213ENST00000514872 DNAJC5Q9H3Z4 198 aa25.6■■□□□ 1.69
SEL1L3-213ENST00000514872 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
SEL1L3-213ENST00000514872 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
SEL1L3-213ENST00000514872 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
SEL1L3-213ENST00000514872 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
SEL1L3-213ENST00000514872 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
SEL1L3-213ENST00000514872 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
SEL1L3-213ENST00000514872 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
SEL1L3-213ENST00000514872 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
SEL1L3-213ENST00000514872 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
SEL1L3-213ENST00000514872 CUX2O14529 1486 aa24.5■■□□□ 1.51
SEL1L3-213ENST00000514872 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
SEL1L3-213ENST00000514872 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
SEL1L3-213ENST00000514872 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
SEL1L3-213ENST00000514872 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
SEL1L3-213ENST00000514872 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
SEL1L3-213ENST00000514872 NESP48681 1621 aa23.74■■□□□ 1.39
SEL1L3-213ENST00000514872 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
SEL1L3-213ENST00000514872 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
SEL1L3-213ENST00000514872 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
SEL1L3-213ENST00000514872 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
SEL1L3-213ENST00000514872 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
SEL1L3-213ENST00000514872 PDS5BQ9NTI5 1447 aa23.38■■□□□ 1.33
SEL1L3-213ENST00000514872 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
SEL1L3-213ENST00000514872 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
SEL1L3-213ENST00000514872 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
SEL1L3-213ENST00000514872 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
SEL1L3-213ENST00000514872 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
SEL1L3-213ENST00000514872 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
SEL1L3-213ENST00000514872 WDR62O43379 1518 aa23.13■■□□□ 1.29
SEL1L3-213ENST00000514872 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
SEL1L3-213ENST00000514872 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
SEL1L3-213ENST00000514872 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
SEL1L3-213ENST00000514872 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
SEL1L3-213ENST00000514872 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
SEL1L3-213ENST00000514872 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
SEL1L3-213ENST00000514872 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
SEL1L3-213ENST00000514872 TRHP20396 242 aaPredicted RBP22.92■■□□□ 1.26
SEL1L3-213ENST00000514872 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
SEL1L3-213ENST00000514872 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
SEL1L3-213ENST00000514872 CYB5RLQ6IPT4 315 aa22.82■■□□□ 1.24
SEL1L3-213ENST00000514872 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
SEL1L3-213ENST00000514872 URB2Q14146 1524 aaKnown RBP22.65■■□□□ 1.22
SEL1L3-213ENST00000514872 CFTRP13569 1480 aa22.59■■□□□ 1.21
SEL1L3-213ENST00000514872 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
SEL1L3-213ENST00000514872 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
SEL1L3-213ENST00000514872 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
SEL1L3-213ENST00000514872 WIZO95785 1651 aa22.46■■□□□ 1.19
SEL1L3-213ENST00000514872 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
SEL1L3-213ENST00000514872 FBLN2P98095 1184 aa22.38■■□□□ 1.17
SEL1L3-213ENST00000514872 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
SEL1L3-213ENST00000514872 CHD1O14646 1710 aa22.26■■□□□ 1.15
SEL1L3-213ENST00000514872 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
SEL1L3-213ENST00000514872 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
SEL1L3-213ENST00000514872 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
SEL1L3-213ENST00000514872 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
SEL1L3-213ENST00000514872 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
SEL1L3-213ENST00000514872 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
SEL1L3-213ENST00000514872 ILDR1Q86SU0 546 aaPredicted RBP22.06■■□□□ 1.12
SEL1L3-213ENST00000514872 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
SEL1L3-213ENST00000514872 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
SEL1L3-213ENST00000514872 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
SEL1L3-213ENST00000514872 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
SEL1L3-213ENST00000514872 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
SEL1L3-213ENST00000514872 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
SEL1L3-213ENST00000514872 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
SEL1L3-213ENST00000514872 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SEL1L3-213ENST00000514872 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
SEL1L3-213ENST00000514872 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SEL1L3-213ENST00000514872 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
SEL1L3-213ENST00000514872 SOGA1O94964 1423 aa21.89■■□□□ 1.09
SEL1L3-213ENST00000514872 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
SEL1L3-213ENST00000514872 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
SEL1L3-213ENST00000514872 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
SEL1L3-213ENST00000514872 WDR97A6NE52 1622 aa21.77■■□□□ 1.08
SEL1L3-213ENST00000514872 KDM4FA0A1W2PPD8 638 aa21.71■■□□□ 1.07
SEL1L3-213ENST00000514872 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
SEL1L3-213ENST00000514872 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
SEL1L3-213ENST00000514872 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
SEL1L3-213ENST00000514872 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
SEL1L3-213ENST00000514872 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
SEL1L3-213ENST00000514872 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
SEL1L3-213ENST00000514872 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
SEL1L3-213ENST00000514872 CUX1P39880 1505 aa21.5■■□□□ 1.03
SEL1L3-213ENST00000514872 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
SEL1L3-213ENST00000514872 NPM1P06748 294 aaKnown RBP eCLIP21.46■■□□□ 1.03
SEL1L3-213ENST00000514872 NUP160Q12769 1436 aa21.46■■□□□ 1.03
SEL1L3-213ENST00000514872 KDM6BO15054 1643 aa21.44■■□□□ 1.02
SEL1L3-213ENST00000514872 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
SEL1L3-213ENST00000514872 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
SEL1L3-213ENST00000514872 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
SEL1L3-213ENST00000514872 PRG4Q92954 1404 aaPredicted RBP21.37■■□□□ 1.01
SEL1L3-213ENST00000514872 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms