RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
COPB2-209ENST00000512242 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
COPB2-209ENST00000512242 ABCC9O60706 1549 aa24■■□□□ 1.43
COPB2-209ENST00000512242 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
COPB2-209ENST00000512242 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
COPB2-209ENST00000512242 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
COPB2-209ENST00000512242 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
COPB2-209ENST00000512242 NACADO15069 1562 aa22.69■■□□□ 1.22
COPB2-209ENST00000512242 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
COPB2-209ENST00000512242 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
COPB2-209ENST00000512242 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
COPB2-209ENST00000512242 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
COPB2-209ENST00000512242 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
COPB2-209ENST00000512242 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
COPB2-209ENST00000512242 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
COPB2-209ENST00000512242 SCRIBQ14160 1630 aa22■■□□□ 1.11
COPB2-209ENST00000512242 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
COPB2-209ENST00000512242 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
COPB2-209ENST00000512242 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
COPB2-209ENST00000512242 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
COPB2-209ENST00000512242 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
COPB2-209ENST00000512242 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
COPB2-209ENST00000512242 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
COPB2-209ENST00000512242 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
COPB2-209ENST00000512242 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
COPB2-209ENST00000512242 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
COPB2-209ENST00000512242 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
COPB2-209ENST00000512242 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
COPB2-209ENST00000512242 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
COPB2-209ENST00000512242 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
COPB2-209ENST00000512242 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
COPB2-209ENST00000512242 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
COPB2-209ENST00000512242 NESP48681 1621 aa20.66■□□□□ 0.9
COPB2-209ENST00000512242 WIZO95785 1651 aa20.55■□□□□ 0.88
COPB2-209ENST00000512242 CUX2O14529 1486 aa20.51■□□□□ 0.87
COPB2-209ENST00000512242 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
COPB2-209ENST00000512242 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
COPB2-209ENST00000512242 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
COPB2-209ENST00000512242 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
COPB2-209ENST00000512242 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
COPB2-209ENST00000512242 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
COPB2-209ENST00000512242 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
COPB2-209ENST00000512242 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
COPB2-209ENST00000512242 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
COPB2-209ENST00000512242 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
COPB2-209ENST00000512242 CFTRP13569 1480 aa20.14■□□□□ 0.81
COPB2-209ENST00000512242 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
COPB2-209ENST00000512242 WDR62O43379 1518 aa20.08■□□□□ 0.81
COPB2-209ENST00000512242 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
COPB2-209ENST00000512242 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
COPB2-209ENST00000512242 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
COPB2-209ENST00000512242 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
COPB2-209ENST00000512242 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
COPB2-209ENST00000512242 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
COPB2-209ENST00000512242 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
COPB2-209ENST00000512242 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
COPB2-209ENST00000512242 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
COPB2-209ENST00000512242 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
COPB2-209ENST00000512242 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
COPB2-209ENST00000512242 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.736e-7■■□□□ 11.9
COPB2-209ENST00000512242 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
COPB2-209ENST00000512242 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
COPB2-209ENST00000512242 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
COPB2-209ENST00000512242 SOGA1O94964 1423 aa19.55■□□□□ 0.72
COPB2-209ENST00000512242 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
COPB2-209ENST00000512242 FBLN2P98095 1184 aa19.54■□□□□ 0.72
COPB2-209ENST00000512242 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
COPB2-209ENST00000512242 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
COPB2-209ENST00000512242 CUX1P39880 1505 aa19.49■□□□□ 0.71
COPB2-209ENST00000512242 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
COPB2-209ENST00000512242 FOXD1Q16676 465 aa19.45■□□□□ 0.7
COPB2-209ENST00000512242 CHD1O14646 1710 aa19.42■□□□□ 0.7
COPB2-209ENST00000512242 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
COPB2-209ENST00000512242 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
COPB2-209ENST00000512242 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
COPB2-209ENST00000512242 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
COPB2-209ENST00000512242 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
COPB2-209ENST00000512242 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
COPB2-209ENST00000512242 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
COPB2-209ENST00000512242 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
COPB2-209ENST00000512242 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
COPB2-209ENST00000512242 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
COPB2-209ENST00000512242 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
COPB2-209ENST00000512242 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
COPB2-209ENST00000512242 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
COPB2-209ENST00000512242 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
COPB2-209ENST00000512242 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
COPB2-209ENST00000512242 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
COPB2-209ENST00000512242 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
COPB2-209ENST00000512242 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
COPB2-209ENST00000512242 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
COPB2-209ENST00000512242 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
COPB2-209ENST00000512242 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
COPB2-209ENST00000512242 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
COPB2-209ENST00000512242 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
COPB2-209ENST00000512242 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
COPB2-209ENST00000512242 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
COPB2-209ENST00000512242 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
COPB2-209ENST00000512242 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
COPB2-209ENST00000512242 NUP160Q12769 1436 aa18.96■□□□□ 0.63
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