RNA–Protein interactions for RNA: ENST00000510633.5

ABCC3-210, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-210ENST00000510633 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
ABCC3-210ENST00000510633 ABCC9O60706 1549 aa33.19■■■□□ 2.9
ABCC3-210ENST00000510633 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
ABCC3-210ENST00000510633 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
ABCC3-210ENST00000510633 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
ABCC3-210ENST00000510633 NACADO15069 1562 aa30.98■■■□□ 2.55
ABCC3-210ENST00000510633 UNC13AQ9UPW8 1703 aa30.71■■■□□ 2.51
ABCC3-210ENST00000510633 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
ABCC3-210ENST00000510633 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
ABCC3-210ENST00000510633 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
ABCC3-210ENST00000510633 MYO15BQ96JP2 1530 aa30.34■■■□□ 2.45
ABCC3-210ENST00000510633 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
ABCC3-210ENST00000510633 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
ABCC3-210ENST00000510633 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
ABCC3-210ENST00000510633 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
ABCC3-210ENST00000510633 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
ABCC3-210ENST00000510633 DCAF1Q9Y4B6 1507 aa29.65■■■□□ 2.34
ABCC3-210ENST00000510633 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
ABCC3-210ENST00000510633 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
ABCC3-210ENST00000510633 CUX2O14529 1486 aa29.04■■■□□ 2.24
ABCC3-210ENST00000510633 ERCC6Q03468 1493 aa28.74■■■□□ 2.19
ABCC3-210ENST00000510633 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
ABCC3-210ENST00000510633 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
ABCC3-210ENST00000510633 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
ABCC3-210ENST00000510633 NESP48681 1621 aa28.29■■■□□ 2.12
ABCC3-210ENST00000510633 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
ABCC3-210ENST00000510633 THOC2Q8NI27 1593 aaKnown RBP28.26■■■□□ 2.11
ABCC3-210ENST00000510633 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
ABCC3-210ENST00000510633 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
ABCC3-210ENST00000510633 LAMC3Q9Y6N6 1575 aa28.1■■■□□ 2.09
ABCC3-210ENST00000510633 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
ABCC3-210ENST00000510633 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
ABCC3-210ENST00000510633 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
ABCC3-210ENST00000510633 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
ABCC3-210ENST00000510633 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
ABCC3-210ENST00000510633 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
ABCC3-210ENST00000510633 WDR62O43379 1518 aa27.69■■■□□ 2.02
ABCC3-210ENST00000510633 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
ABCC3-210ENST00000510633 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
ABCC3-210ENST00000510633 OSCARQ8IYS5 282 aa27.51■■□□□ 1.99
ABCC3-210ENST00000510633 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ABCC3-210ENST00000510633 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
ABCC3-210ENST00000510633 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
ABCC3-210ENST00000510633 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
ABCC3-210ENST00000510633 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
ABCC3-210ENST00000510633 WIZO95785 1651 aa27.24■■□□□ 1.95
ABCC3-210ENST00000510633 CFTRP13569 1480 aa27.18■■□□□ 1.94
ABCC3-210ENST00000510633 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
ABCC3-210ENST00000510633 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
ABCC3-210ENST00000510633 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
ABCC3-210ENST00000510633 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
ABCC3-210ENST00000510633 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
ABCC3-210ENST00000510633 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
ABCC3-210ENST00000510633 CYB5RLQ6IPT4 315 aa26.86■■□□□ 1.89
ABCC3-210ENST00000510633 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
ABCC3-210ENST00000510633 TRHP20396 242 aaPredicted RBP26.82■■□□□ 1.88
ABCC3-210ENST00000510633 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
ABCC3-210ENST00000510633 CHD1O14646 1710 aa26.76■■□□□ 1.87
ABCC3-210ENST00000510633 ARAP1Q96P48 1450 aa26.75■■□□□ 1.87
ABCC3-210ENST00000510633 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
ABCC3-210ENST00000510633 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
ABCC3-210ENST00000510633 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.86
ABCC3-210ENST00000510633 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
ABCC3-210ENST00000510633 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
ABCC3-210ENST00000510633 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
ABCC3-210ENST00000510633 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
ABCC3-210ENST00000510633 FBLN2P98095 1184 aa26.48■■□□□ 1.83
ABCC3-210ENST00000510633 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
ABCC3-210ENST00000510633 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
ABCC3-210ENST00000510633 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
ABCC3-210ENST00000510633 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
ABCC3-210ENST00000510633 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
ABCC3-210ENST00000510633 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
ABCC3-210ENST00000510633 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
ABCC3-210ENST00000510633 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
ABCC3-210ENST00000510633 SOGA1O94964 1423 aa26.24■■□□□ 1.79
ABCC3-210ENST00000510633 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
ABCC3-210ENST00000510633 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
ABCC3-210ENST00000510633 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
ABCC3-210ENST00000510633 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
ABCC3-210ENST00000510633 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
ABCC3-210ENST00000510633 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
ABCC3-210ENST00000510633 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
ABCC3-210ENST00000510633 CUX1P39880 1505 aa25.96■■□□□ 1.75
ABCC3-210ENST00000510633 KIF13AQ9H1H9 1805 aa25.89■■□□□ 1.74
ABCC3-210ENST00000510633 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
ABCC3-210ENST00000510633 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
ABCC3-210ENST00000510633 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
ABCC3-210ENST00000510633 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
ABCC3-210ENST00000510633 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
ABCC3-210ENST00000510633 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
ABCC3-210ENST00000510633 NUP160Q12769 1436 aa25.75■■□□□ 1.71
ABCC3-210ENST00000510633 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
ABCC3-210ENST00000510633 ABCC10Q5T3U5 1492 aa25.59■■□□□ 1.69
ABCC3-210ENST00000510633 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
ABCC3-210ENST00000510633 ILDR1Q86SU0 546 aaPredicted RBP25.54■■□□□ 1.68
ABCC3-210ENST00000510633 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
ABCC3-210ENST00000510633 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
ABCC3-210ENST00000510633 KDM4FA0A1W2PPD8 638 aa25.52■■□□□ 1.68
ABCC3-210ENST00000510633 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms