RNA–Protein interactions for RNA: ENST00000509097.1

GFM2-206, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 1 (best)

Gene GFM2, Length 1,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-206ENST00000509097 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
GFM2-206ENST00000509097 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
GFM2-206ENST00000509097 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
GFM2-206ENST00000509097 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
GFM2-206ENST00000509097 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
GFM2-206ENST00000509097 ABCC9O60706 1549 aa23.7■■□□□ 1.38
GFM2-206ENST00000509097 FOXD1Q16676 465 aa23.2■■□□□ 1.3
GFM2-206ENST00000509097 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
GFM2-206ENST00000509097 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
GFM2-206ENST00000509097 POTEDQ86YR6 584 aa22.74■■□□□ 1.23
GFM2-206ENST00000509097 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
GFM2-206ENST00000509097 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
GFM2-206ENST00000509097 MSH5O43196 834 aa21.96■■□□□ 1.11
GFM2-206ENST00000509097 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
GFM2-206ENST00000509097 NACADO15069 1562 aa21.84■■□□□ 1.09
GFM2-206ENST00000509097 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
GFM2-206ENST00000509097 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
GFM2-206ENST00000509097 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
GFM2-206ENST00000509097 PIAS4Q8N2W9 510 aaPredicted RBP21.42■■□□□ 1.02
GFM2-206ENST00000509097 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
GFM2-206ENST00000509097 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
GFM2-206ENST00000509097 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
GFM2-206ENST00000509097 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
GFM2-206ENST00000509097 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
GFM2-206ENST00000509097 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
GFM2-206ENST00000509097 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
GFM2-206ENST00000509097 ADRA2BP18089 450 aa20.96■□□□□ 0.95
GFM2-206ENST00000509097 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
GFM2-206ENST00000509097 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
GFM2-206ENST00000509097 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
GFM2-206ENST00000509097 CUX2O14529 1486 aa20.64■□□□□ 0.89
GFM2-206ENST00000509097 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
GFM2-206ENST00000509097 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
GFM2-206ENST00000509097 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
GFM2-206ENST00000509097 NESP48681 1621 aa20.16■□□□□ 0.82
GFM2-206ENST00000509097 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
GFM2-206ENST00000509097 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
GFM2-206ENST00000509097 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
GFM2-206ENST00000509097 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
GFM2-206ENST00000509097 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
GFM2-206ENST00000509097 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.76
GFM2-206ENST00000509097 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
GFM2-206ENST00000509097 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
GFM2-206ENST00000509097 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
GFM2-206ENST00000509097 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
GFM2-206ENST00000509097 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
GFM2-206ENST00000509097 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
GFM2-206ENST00000509097 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
GFM2-206ENST00000509097 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
GFM2-206ENST00000509097 WDR62O43379 1518 aa19.57■□□□□ 0.72
GFM2-206ENST00000509097 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
GFM2-206ENST00000509097 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
GFM2-206ENST00000509097 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
GFM2-206ENST00000509097 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
GFM2-206ENST00000509097 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
GFM2-206ENST00000509097 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
GFM2-206ENST00000509097 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
GFM2-206ENST00000509097 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
GFM2-206ENST00000509097 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
GFM2-206ENST00000509097 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
GFM2-206ENST00000509097 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
GFM2-206ENST00000509097 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
GFM2-206ENST00000509097 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
GFM2-206ENST00000509097 CFTRP13569 1480 aa19.24■□□□□ 0.67
GFM2-206ENST00000509097 WIZO95785 1651 aa19.16■□□□□ 0.66
GFM2-206ENST00000509097 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
GFM2-206ENST00000509097 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
GFM2-206ENST00000509097 KCNA4P22459 653 aa19.1■□□□□ 0.65
GFM2-206ENST00000509097 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
GFM2-206ENST00000509097 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
GFM2-206ENST00000509097 FBLN2P98095 1184 aa19.02■□□□□ 0.64
GFM2-206ENST00000509097 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
GFM2-206ENST00000509097 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.62
GFM2-206ENST00000509097 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
GFM2-206ENST00000509097 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
GFM2-206ENST00000509097 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
GFM2-206ENST00000509097 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
GFM2-206ENST00000509097 CHD1O14646 1710 aa18.8■□□□□ 0.6
GFM2-206ENST00000509097 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
GFM2-206ENST00000509097 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
GFM2-206ENST00000509097 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
GFM2-206ENST00000509097 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
GFM2-206ENST00000509097 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
GFM2-206ENST00000509097 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
GFM2-206ENST00000509097 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
GFM2-206ENST00000509097 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
GFM2-206ENST00000509097 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
GFM2-206ENST00000509097 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
GFM2-206ENST00000509097 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
GFM2-206ENST00000509097 SOGA1O94964 1423 aa18.66■□□□□ 0.58
GFM2-206ENST00000509097 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
GFM2-206ENST00000509097 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
GFM2-206ENST00000509097 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
GFM2-206ENST00000509097 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
GFM2-206ENST00000509097 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
GFM2-206ENST00000509097 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
GFM2-206ENST00000509097 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
GFM2-206ENST00000509097 ILDR1Q86SU0 546 aaPredicted RBP18.54■□□□□ 0.56
GFM2-206ENST00000509097 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
GFM2-206ENST00000509097 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms