RNA–Protein interactions for RNA: ENST00000508268.1

TMA16-204, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2 BASIC

Gene TMA16, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-204ENST00000508268 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
TMA16-204ENST00000508268 ABCC9O60706 1549 aa28.72■■■□□ 2.19
TMA16-204ENST00000508268 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
TMA16-204ENST00000508268 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
TMA16-204ENST00000508268 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
TMA16-204ENST00000508268 NACADO15069 1562 aa26.73■■□□□ 1.87
TMA16-204ENST00000508268 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
TMA16-204ENST00000508268 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
TMA16-204ENST00000508268 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
TMA16-204ENST00000508268 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
TMA16-204ENST00000508268 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
TMA16-204ENST00000508268 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
TMA16-204ENST00000508268 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
TMA16-204ENST00000508268 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.73
TMA16-204ENST00000508268 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
TMA16-204ENST00000508268 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
TMA16-204ENST00000508268 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
TMA16-204ENST00000508268 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
TMA16-204ENST00000508268 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
TMA16-204ENST00000508268 CUX2O14529 1486 aa25.02■■□□□ 1.6
TMA16-204ENST00000508268 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
TMA16-204ENST00000508268 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
TMA16-204ENST00000508268 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
TMA16-204ENST00000508268 NESP48681 1621 aa24.47■■□□□ 1.51
TMA16-204ENST00000508268 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
TMA16-204ENST00000508268 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
TMA16-204ENST00000508268 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
TMA16-204ENST00000508268 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
TMA16-204ENST00000508268 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
TMA16-204ENST00000508268 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
TMA16-204ENST00000508268 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
TMA16-204ENST00000508268 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
TMA16-204ENST00000508268 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
TMA16-204ENST00000508268 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
TMA16-204ENST00000508268 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
TMA16-204ENST00000508268 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
TMA16-204ENST00000508268 WDR62O43379 1518 aa23.91■■□□□ 1.42
TMA16-204ENST00000508268 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
TMA16-204ENST00000508268 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
TMA16-204ENST00000508268 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
TMA16-204ENST00000508268 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
TMA16-204ENST00000508268 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
TMA16-204ENST00000508268 WIZO95785 1651 aa23.58■■□□□ 1.37
TMA16-204ENST00000508268 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
TMA16-204ENST00000508268 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
TMA16-204ENST00000508268 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
TMA16-204ENST00000508268 CFTRP13569 1480 aa23.47■■□□□ 1.35
TMA16-204ENST00000508268 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
TMA16-204ENST00000508268 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
TMA16-204ENST00000508268 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
TMA16-204ENST00000508268 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
TMA16-204ENST00000508268 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
TMA16-204ENST00000508268 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
TMA16-204ENST00000508268 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
TMA16-204ENST00000508268 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
TMA16-204ENST00000508268 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
TMA16-204ENST00000508268 CHD1O14646 1710 aa23.13■■□□□ 1.29
TMA16-204ENST00000508268 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
TMA16-204ENST00000508268 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
TMA16-204ENST00000508268 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
TMA16-204ENST00000508268 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
TMA16-204ENST00000508268 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
TMA16-204ENST00000508268 FBLN2P98095 1184 aa23■■□□□ 1.27
TMA16-204ENST00000508268 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
TMA16-204ENST00000508268 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.275e-7■■■■□ 21
TMA16-204ENST00000508268 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
TMA16-204ENST00000508268 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
TMA16-204ENST00000508268 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
TMA16-204ENST00000508268 CLASP1Q7Z460 1538 aa22.8■■□□□ 1.24
TMA16-204ENST00000508268 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
TMA16-204ENST00000508268 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
TMA16-204ENST00000508268 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
TMA16-204ENST00000508268 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
TMA16-204ENST00000508268 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
TMA16-204ENST00000508268 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
TMA16-204ENST00000508268 SOGA1O94964 1423 aa22.7■■□□□ 1.22
TMA16-204ENST00000508268 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
TMA16-204ENST00000508268 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
TMA16-204ENST00000508268 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
TMA16-204ENST00000508268 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
TMA16-204ENST00000508268 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TMA16-204ENST00000508268 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
TMA16-204ENST00000508268 CUX1P39880 1505 aa22.47■■□□□ 1.19
TMA16-204ENST00000508268 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
TMA16-204ENST00000508268 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
TMA16-204ENST00000508268 KIF13AQ9H1H9 1805 aa22.32■■□□□ 1.16
TMA16-204ENST00000508268 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
TMA16-204ENST00000508268 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
TMA16-204ENST00000508268 ABCA10Q8WWZ4 1543 aa22.3■■□□□ 1.16
TMA16-204ENST00000508268 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
TMA16-204ENST00000508268 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
TMA16-204ENST00000508268 NUP160Q12769 1436 aa22.23■■□□□ 1.15
TMA16-204ENST00000508268 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
TMA16-204ENST00000508268 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
TMA16-204ENST00000508268 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
TMA16-204ENST00000508268 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
TMA16-204ENST00000508268 ABCC10Q5T3U5 1492 aa22.09■■□□□ 1.13
TMA16-204ENST00000508268 KDM6BO15054 1643 aa22.06■■□□□ 1.12
TMA16-204ENST00000508268 DIP2BQ9P265 1576 aa22.04■■□□□ 1.12
TMA16-204ENST00000508268 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms