RNA–Protein interactions for RNA: ENST00000507285.5

TTC39B-206, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC39B, Length 2,243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-206ENST00000507285 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
TTC39B-206ENST00000507285 ABCC9O60706 1549 aa17.3■□□□□ 0.36
TTC39B-206ENST00000507285 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
TTC39B-206ENST00000507285 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
TTC39B-206ENST00000507285 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
TTC39B-206ENST00000507285 NACADO15069 1562 aa16.38■□□□□ 0.21
TTC39B-206ENST00000507285 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
TTC39B-206ENST00000507285 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
TTC39B-206ENST00000507285 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
TTC39B-206ENST00000507285 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
TTC39B-206ENST00000507285 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
TTC39B-206ENST00000507285 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
TTC39B-206ENST00000507285 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
TTC39B-206ENST00000507285 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
TTC39B-206ENST00000507285 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
TTC39B-206ENST00000507285 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
TTC39B-206ENST00000507285 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
TTC39B-206ENST00000507285 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
TTC39B-206ENST00000507285 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
TTC39B-206ENST00000507285 EIF4G1Q04637 1599 aaKnown RBP15.59■□□□□ 0.09
TTC39B-206ENST00000507285 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
TTC39B-206ENST00000507285 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
TTC39B-206ENST00000507285 DNAJC5Q9H3Z4 198 aa15.05■□□□□ 0
TTC39B-206ENST00000507285 SMARCA2P51531 1590 aa15.03■□□□□ -0
TTC39B-206ENST00000507285 CUX2O14529 1486 aa15.02■□□□□ -0
TTC39B-206ENST00000507285 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
TTC39B-206ENST00000507285 HMGXB3Q12766 1538 aa15□□□□□ -0.01
TTC39B-206ENST00000507285 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
TTC39B-206ENST00000507285 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
TTC39B-206ENST00000507285 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
TTC39B-206ENST00000507285 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
TTC39B-206ENST00000507285 NESP48681 1621 aa14.81□□□□□ -0.04
TTC39B-206ENST00000507285 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
TTC39B-206ENST00000507285 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
TTC39B-206ENST00000507285 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
TTC39B-206ENST00000507285 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
TTC39B-206ENST00000507285 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
TTC39B-206ENST00000507285 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
TTC39B-206ENST00000507285 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
TTC39B-206ENST00000507285 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
TTC39B-206ENST00000507285 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
TTC39B-206ENST00000507285 WIZO95785 1651 aa14.53□□□□□ -0.08
TTC39B-206ENST00000507285 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
TTC39B-206ENST00000507285 WDR62O43379 1518 aa14.53□□□□□ -0.08
TTC39B-206ENST00000507285 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
TTC39B-206ENST00000507285 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
TTC39B-206ENST00000507285 CFTRP13569 1480 aa14.49□□□□□ -0.09
TTC39B-206ENST00000507285 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
TTC39B-206ENST00000507285 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
TTC39B-206ENST00000507285 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
TTC39B-206ENST00000507285 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
TTC39B-206ENST00000507285 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.12
TTC39B-206ENST00000507285 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
TTC39B-206ENST00000507285 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
TTC39B-206ENST00000507285 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
TTC39B-206ENST00000507285 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
TTC39B-206ENST00000507285 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
TTC39B-206ENST00000507285 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
TTC39B-206ENST00000507285 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
TTC39B-206ENST00000507285 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
TTC39B-206ENST00000507285 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.16
TTC39B-206ENST00000507285 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
TTC39B-206ENST00000507285 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
TTC39B-206ENST00000507285 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
TTC39B-206ENST00000507285 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
TTC39B-206ENST00000507285 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
TTC39B-206ENST00000507285 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
TTC39B-206ENST00000507285 SOGA1O94964 1423 aa14.01□□□□□ -0.17
TTC39B-206ENST00000507285 FBLN2P98095 1184 aa13.99□□□□□ -0.17
TTC39B-206ENST00000507285 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
TTC39B-206ENST00000507285 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
TTC39B-206ENST00000507285 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.17
TTC39B-206ENST00000507285 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
TTC39B-206ENST00000507285 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
TTC39B-206ENST00000507285 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
TTC39B-206ENST00000507285 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
TTC39B-206ENST00000507285 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
TTC39B-206ENST00000507285 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
TTC39B-206ENST00000507285 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
TTC39B-206ENST00000507285 CUX1P39880 1505 aa13.89□□□□□ -0.19
TTC39B-206ENST00000507285 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
TTC39B-206ENST00000507285 CHD1O14646 1710 aa13.88□□□□□ -0.19
TTC39B-206ENST00000507285 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
TTC39B-206ENST00000507285 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
TTC39B-206ENST00000507285 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
TTC39B-206ENST00000507285 CLASP1Q7Z460 1538 aa13.84□□□□□ -0.19
TTC39B-206ENST00000507285 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
TTC39B-206ENST00000507285 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
TTC39B-206ENST00000507285 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
TTC39B-206ENST00000507285 KCNA4P22459 653 aa13.78□□□□□ -0.2
TTC39B-206ENST00000507285 WRNQ14191 1432 aaPredicted RBP eCLIP13.78□□□□□ -0.2
TTC39B-206ENST00000507285 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
TTC39B-206ENST00000507285 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
TTC39B-206ENST00000507285 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
TTC39B-206ENST00000507285 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
TTC39B-206ENST00000507285 NUP160Q12769 1436 aa13.67□□□□□ -0.22
TTC39B-206ENST00000507285 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
TTC39B-206ENST00000507285 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
TTC39B-206ENST00000507285 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
TTC39B-206ENST00000507285 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms