RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
CLPTM1L-204ENST00000503534 ABCC9O60706 1549 aa23.12■■□□□ 1.29
CLPTM1L-204ENST00000503534 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
CLPTM1L-204ENST00000503534 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
CLPTM1L-204ENST00000503534 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
CLPTM1L-204ENST00000503534 NACADO15069 1562 aa21.54■■□□□ 1.04
CLPTM1L-204ENST00000503534 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLPTM1L-204ENST00000503534 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
CLPTM1L-204ENST00000503534 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
CLPTM1L-204ENST00000503534 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
CLPTM1L-204ENST00000503534 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
CLPTM1L-204ENST00000503534 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
CLPTM1L-204ENST00000503534 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
CLPTM1L-204ENST00000503534 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
CLPTM1L-204ENST00000503534 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
CLPTM1L-204ENST00000503534 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
CLPTM1L-204ENST00000503534 DCAF1Q9Y4B6 1507 aa20.59■□□□□ 0.89
CLPTM1L-204ENST00000503534 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
CLPTM1L-204ENST00000503534 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CLPTM1L-204ENST00000503534 CUX2O14529 1486 aa20.18■□□□□ 0.82
CLPTM1L-204ENST00000503534 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
CLPTM1L-204ENST00000503534 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
CLPTM1L-204ENST00000503534 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
CLPTM1L-204ENST00000503534 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
CLPTM1L-204ENST00000503534 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
CLPTM1L-204ENST00000503534 NESP48681 1621 aa19.69■□□□□ 0.74
CLPTM1L-204ENST00000503534 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
CLPTM1L-204ENST00000503534 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
CLPTM1L-204ENST00000503534 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
CLPTM1L-204ENST00000503534 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
CLPTM1L-204ENST00000503534 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
CLPTM1L-204ENST00000503534 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
CLPTM1L-204ENST00000503534 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
CLPTM1L-204ENST00000503534 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
CLPTM1L-204ENST00000503534 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
CLPTM1L-204ENST00000503534 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
CLPTM1L-204ENST00000503534 WDR62O43379 1518 aa19.25■□□□□ 0.67
CLPTM1L-204ENST00000503534 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
CLPTM1L-204ENST00000503534 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
CLPTM1L-204ENST00000503534 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
CLPTM1L-204ENST00000503534 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
CLPTM1L-204ENST00000503534 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CLPTM1L-204ENST00000503534 WIZO95785 1651 aa18.97■□□□□ 0.63
CLPTM1L-204ENST00000503534 RIMBP3CA6NJZ7 1639 aa18.96■□□□□ 0.63
CLPTM1L-204ENST00000503534 RIMBP3BA6NNM3 1639 aa18.96■□□□□ 0.63
CLPTM1L-204ENST00000503534 RIMBP3Q9UFD9 1639 aa18.96■□□□□ 0.63
CLPTM1L-204ENST00000503534 CFTRP13569 1480 aa18.9■□□□□ 0.62
CLPTM1L-204ENST00000503534 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
CLPTM1L-204ENST00000503534 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
CLPTM1L-204ENST00000503534 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
CLPTM1L-204ENST00000503534 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
CLPTM1L-204ENST00000503534 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
CLPTM1L-204ENST00000503534 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
CLPTM1L-204ENST00000503534 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
CLPTM1L-204ENST00000503534 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1L-204ENST00000503534 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.58
CLPTM1L-204ENST00000503534 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1L-204ENST00000503534 CHD1O14646 1710 aa18.62■□□□□ 0.57
CLPTM1L-204ENST00000503534 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
CLPTM1L-204ENST00000503534 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
CLPTM1L-204ENST00000503534 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1L-204ENST00000503534 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
CLPTM1L-204ENST00000503534 FBLN2P98095 1184 aa18.54■□□□□ 0.56
CLPTM1L-204ENST00000503534 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
CLPTM1L-204ENST00000503534 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■■■□□ 17.9
CLPTM1L-204ENST00000503534 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
CLPTM1L-204ENST00000503534 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
CLPTM1L-204ENST00000503534 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
CLPTM1L-204ENST00000503534 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
CLPTM1L-204ENST00000503534 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
CLPTM1L-204ENST00000503534 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
CLPTM1L-204ENST00000503534 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
CLPTM1L-204ENST00000503534 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
CLPTM1L-204ENST00000503534 SOGA1O94964 1423 aa18.31■□□□□ 0.52
CLPTM1L-204ENST00000503534 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
CLPTM1L-204ENST00000503534 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
CLPTM1L-204ENST00000503534 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
CLPTM1L-204ENST00000503534 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
CLPTM1L-204ENST00000503534 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
CLPTM1L-204ENST00000503534 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
CLPTM1L-204ENST00000503534 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
CLPTM1L-204ENST00000503534 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
CLPTM1L-204ENST00000503534 CUX1P39880 1505 aa18.07■□□□□ 0.48
CLPTM1L-204ENST00000503534 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
CLPTM1L-204ENST00000503534 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
CLPTM1L-204ENST00000503534 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
CLPTM1L-204ENST00000503534 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
CLPTM1L-204ENST00000503534 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
CLPTM1L-204ENST00000503534 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
CLPTM1L-204ENST00000503534 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
CLPTM1L-204ENST00000503534 NUP160Q12769 1436 aa17.89■□□□□ 0.46
CLPTM1L-204ENST00000503534 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
CLPTM1L-204ENST00000503534 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
CLPTM1L-204ENST00000503534 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLPTM1L-204ENST00000503534 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
CLPTM1L-204ENST00000503534 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
CLPTM1L-204ENST00000503534 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
CLPTM1L-204ENST00000503534 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1L-204ENST00000503534 KDM6BO15054 1643 aa17.77■□□□□ 0.44
CLPTM1L-204ENST00000503534 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms