RNA–Protein interactions for RNA: ENST00000503479.6

POLK-203, Transcript of DNA polymerase kappa, humanhuman

TSL 2

Gene POLK, Length 2,482 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLK-203ENST00000503479 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
POLK-203ENST00000503479 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
POLK-203ENST00000503479 ABCC9O60706 1549 aa19.32■□□□□ 0.68
POLK-203ENST00000503479 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
POLK-203ENST00000503479 NACADO15069 1562 aa18.67■□□□□ 0.58
POLK-203ENST00000503479 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
POLK-203ENST00000503479 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
POLK-203ENST00000503479 SHROOM4Q9ULL8 1493 aa18.24■□□□□ 0.51
POLK-203ENST00000503479 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.5
POLK-203ENST00000503479 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
POLK-203ENST00000503479 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
POLK-203ENST00000503479 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
POLK-203ENST00000503479 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
POLK-203ENST00000503479 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
POLK-203ENST00000503479 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
POLK-203ENST00000503479 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
POLK-203ENST00000503479 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
POLK-203ENST00000503479 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
POLK-203ENST00000503479 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
POLK-203ENST00000503479 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
POLK-203ENST00000503479 SMARCA2P51531 1590 aa17.08■□□□□ 0.33
POLK-203ENST00000503479 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
POLK-203ENST00000503479 CUX2O14529 1486 aa17.02■□□□□ 0.32
POLK-203ENST00000503479 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
POLK-203ENST00000503479 SMARCA4P51532 1647 aa17■□□□□ 0.31
POLK-203ENST00000503479 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
POLK-203ENST00000503479 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
POLK-203ENST00000503479 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
POLK-203ENST00000503479 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
POLK-203ENST00000503479 ERCC6Q03468 1493 aa16.77■□□□□ 0.27
POLK-203ENST00000503479 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
POLK-203ENST00000503479 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
POLK-203ENST00000503479 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
POLK-203ENST00000503479 NESP48681 1621 aa16.58■□□□□ 0.24
POLK-203ENST00000503479 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
POLK-203ENST00000503479 WDR62O43379 1518 aa16.49■□□□□ 0.23
POLK-203ENST00000503479 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
POLK-203ENST00000503479 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
POLK-203ENST00000503479 WIZO95785 1651 aa16.43■□□□□ 0.22
POLK-203ENST00000503479 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
POLK-203ENST00000503479 CFTRP13569 1480 aa16.41■□□□□ 0.22
POLK-203ENST00000503479 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
POLK-203ENST00000503479 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
POLK-203ENST00000503479 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
POLK-203ENST00000503479 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
POLK-203ENST00000503479 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
POLK-203ENST00000503479 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
POLK-203ENST00000503479 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
POLK-203ENST00000503479 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
POLK-203ENST00000503479 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
POLK-203ENST00000503479 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
POLK-203ENST00000503479 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
POLK-203ENST00000503479 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
POLK-203ENST00000503479 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
POLK-203ENST00000503479 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
POLK-203ENST00000503479 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
POLK-203ENST00000503479 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
POLK-203ENST00000503479 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
POLK-203ENST00000503479 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
POLK-203ENST00000503479 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
POLK-203ENST00000503479 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.12
POLK-203ENST00000503479 ARHGEF11O15085 1522 aa15.77■□□□□ 0.12
POLK-203ENST00000503479 SOGA1O94964 1423 aa15.75■□□□□ 0.11
POLK-203ENST00000503479 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
POLK-203ENST00000503479 CHD1O14646 1710 aa15.74■□□□□ 0.11
POLK-203ENST00000503479 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
POLK-203ENST00000503479 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
POLK-203ENST00000503479 CUX1P39880 1505 aa15.7■□□□□ 0.1
POLK-203ENST00000503479 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■■■ 26.9
POLK-203ENST00000503479 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
POLK-203ENST00000503479 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
POLK-203ENST00000503479 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
POLK-203ENST00000503479 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
POLK-203ENST00000503479 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
POLK-203ENST00000503479 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
POLK-203ENST00000503479 SNAPC4Q5SXM2 1469 aa15.63■□□□□ 0.09
POLK-203ENST00000503479 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
POLK-203ENST00000503479 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
POLK-203ENST00000503479 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
POLK-203ENST00000503479 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
POLK-203ENST00000503479 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
POLK-203ENST00000503479 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
POLK-203ENST00000503479 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
POLK-203ENST00000503479 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
POLK-203ENST00000503479 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
POLK-203ENST00000503479 NUP160Q12769 1436 aa15.49■□□□□ 0.07
POLK-203ENST00000503479 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
POLK-203ENST00000503479 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
POLK-203ENST00000503479 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
POLK-203ENST00000503479 GRIN2AQ12879 1464 aa15.46■□□□□ 0.07
POLK-203ENST00000503479 CYB5RLQ6IPT4 315 aa15.44■□□□□ 0.06
POLK-203ENST00000503479 FBLN2P98095 1184 aa15.42■□□□□ 0.06
POLK-203ENST00000503479 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
POLK-203ENST00000503479 CUL7Q14999 1698 aa15.28■□□□□ 0.04
POLK-203ENST00000503479 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
POLK-203ENST00000503479 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
POLK-203ENST00000503479 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
POLK-203ENST00000503479 KIAA0586Q9BVV6 1533 aa15.22■□□□□ 0.03
POLK-203ENST00000503479 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
POLK-203ENST00000503479 MAPKBP1O60336 1514 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms