RNA–Protein interactions for RNA: ENST00000497704.3

RN7SL612P-201, Transcript of RNA, 7SL, cytoplasmic 612, pseudogene, humanhuman

BASIC

Gene RN7SL612P, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL612P-201ENST00000497704 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
RN7SL612P-201ENST00000497704 ABCC9O60706 1549 aa17.04■□□□□ 0.32
RN7SL612P-201ENST00000497704 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
RN7SL612P-201ENST00000497704 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
RN7SL612P-201ENST00000497704 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
RN7SL612P-201ENST00000497704 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
RN7SL612P-201ENST00000497704 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
RN7SL612P-201ENST00000497704 NACADO15069 1562 aa15.69■□□□□ 0.1
RN7SL612P-201ENST00000497704 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
RN7SL612P-201ENST00000497704 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
RN7SL612P-201ENST00000497704 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
RN7SL612P-201ENST00000497704 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
RN7SL612P-201ENST00000497704 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
RN7SL612P-201ENST00000497704 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
RN7SL612P-201ENST00000497704 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
RN7SL612P-201ENST00000497704 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
RN7SL612P-201ENST00000497704 CUX2O14529 1486 aa15.02■□□□□ -0
RN7SL612P-201ENST00000497704 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
RN7SL612P-201ENST00000497704 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
RN7SL612P-201ENST00000497704 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
RN7SL612P-201ENST00000497704 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
RN7SL612P-201ENST00000497704 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
RN7SL612P-201ENST00000497704 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
RN7SL612P-201ENST00000497704 NESP48681 1621 aa14.42□□□□□ -0.1
RN7SL612P-201ENST00000497704 THOC2Q8NI27 1593 aaKnown RBP14.42□□□□□ -0.1
RN7SL612P-201ENST00000497704 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
RN7SL612P-201ENST00000497704 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
RN7SL612P-201ENST00000497704 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
RN7SL612P-201ENST00000497704 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
RN7SL612P-201ENST00000497704 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
RN7SL612P-201ENST00000497704 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
RN7SL612P-201ENST00000497704 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
RN7SL612P-201ENST00000497704 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
RN7SL612P-201ENST00000497704 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
RN7SL612P-201ENST00000497704 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
RN7SL612P-201ENST00000497704 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
RN7SL612P-201ENST00000497704 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
RN7SL612P-201ENST00000497704 WDR62O43379 1518 aa14.1□□□□□ -0.15
RN7SL612P-201ENST00000497704 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
RN7SL612P-201ENST00000497704 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
RN7SL612P-201ENST00000497704 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
RN7SL612P-201ENST00000497704 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
RN7SL612P-201ENST00000497704 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
RN7SL612P-201ENST00000497704 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
RN7SL612P-201ENST00000497704 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
RN7SL612P-201ENST00000497704 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
RN7SL612P-201ENST00000497704 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
RN7SL612P-201ENST00000497704 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
RN7SL612P-201ENST00000497704 CFTRP13569 1480 aa13.7□□□□□ -0.22
RN7SL612P-201ENST00000497704 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
RN7SL612P-201ENST00000497704 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
RN7SL612P-201ENST00000497704 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
RN7SL612P-201ENST00000497704 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
RN7SL612P-201ENST00000497704 CHD1O14646 1710 aa13.59□□□□□ -0.23
RN7SL612P-201ENST00000497704 WIZO95785 1651 aa13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 FBLN2P98095 1184 aa13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
RN7SL612P-201ENST00000497704 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
RN7SL612P-201ENST00000497704 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
RN7SL612P-201ENST00000497704 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
RN7SL612P-201ENST00000497704 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
RN7SL612P-201ENST00000497704 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
RN7SL612P-201ENST00000497704 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
RN7SL612P-201ENST00000497704 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
RN7SL612P-201ENST00000497704 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
RN7SL612P-201ENST00000497704 GAPVD1Q14C86 1478 aa13.38□□□□□ -0.27
RN7SL612P-201ENST00000497704 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
RN7SL612P-201ENST00000497704 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
RN7SL612P-201ENST00000497704 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
RN7SL612P-201ENST00000497704 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
RN7SL612P-201ENST00000497704 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
RN7SL612P-201ENST00000497704 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
RN7SL612P-201ENST00000497704 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
RN7SL612P-201ENST00000497704 SOGA1O94964 1423 aa13.27□□□□□ -0.29
RN7SL612P-201ENST00000497704 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
RN7SL612P-201ENST00000497704 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
RN7SL612P-201ENST00000497704 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 FAM69CQ0P6D2 419 aa13.15□□□□□ -0.3
RN7SL612P-201ENST00000497704 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
RN7SL612P-201ENST00000497704 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
RN7SL612P-201ENST00000497704 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
RN7SL612P-201ENST00000497704 KDM6BO15054 1643 aa13.11□□□□□ -0.31
RN7SL612P-201ENST00000497704 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
RN7SL612P-201ENST00000497704 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
RN7SL612P-201ENST00000497704 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
RN7SL612P-201ENST00000497704 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
RN7SL612P-201ENST00000497704 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
RN7SL612P-201ENST00000497704 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
RN7SL612P-201ENST00000497704 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 NUP160Q12769 1436 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
RN7SL612P-201ENST00000497704 ADGRL1O94910 1474 aa13.01□□□□□ -0.33
RN7SL612P-201ENST00000497704 CUX1P39880 1505 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms