RNA–Protein interactions for RNA: ENST00000493010.2

FOXP1-213, Transcript of forkhead box P1, humanhuman

TSL 4

Gene FOXP1, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-213ENST00000493010 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
FOXP1-213ENST00000493010 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
FOXP1-213ENST00000493010 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
FOXP1-213ENST00000493010 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
FOXP1-213ENST00000493010 ABCC9O60706 1549 aa18.68■□□□□ 0.58
FOXP1-213ENST00000493010 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
FOXP1-213ENST00000493010 NACADO15069 1562 aa18.03■□□□□ 0.48
FOXP1-213ENST00000493010 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
FOXP1-213ENST00000493010 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
FOXP1-213ENST00000493010 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
FOXP1-213ENST00000493010 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
FOXP1-213ENST00000493010 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
FOXP1-213ENST00000493010 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
FOXP1-213ENST00000493010 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
FOXP1-213ENST00000493010 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
FOXP1-213ENST00000493010 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
FOXP1-213ENST00000493010 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
FOXP1-213ENST00000493010 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
FOXP1-213ENST00000493010 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
FOXP1-213ENST00000493010 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
FOXP1-213ENST00000493010 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
FOXP1-213ENST00000493010 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
FOXP1-213ENST00000493010 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
FOXP1-213ENST00000493010 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
FOXP1-213ENST00000493010 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
FOXP1-213ENST00000493010 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
FOXP1-213ENST00000493010 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
FOXP1-213ENST00000493010 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
FOXP1-213ENST00000493010 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
FOXP1-213ENST00000493010 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
FOXP1-213ENST00000493010 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
FOXP1-213ENST00000493010 WIZO95785 1651 aa16.27■□□□□ 0.2
FOXP1-213ENST00000493010 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
FOXP1-213ENST00000493010 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
FOXP1-213ENST00000493010 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
FOXP1-213ENST00000493010 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
FOXP1-213ENST00000493010 NESP48681 1621 aa16.12■□□□□ 0.17
FOXP1-213ENST00000493010 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
FOXP1-213ENST00000493010 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
FOXP1-213ENST00000493010 CUX2O14529 1486 aa16.09■□□□□ 0.17
FOXP1-213ENST00000493010 CFTRP13569 1480 aa15.99■□□□□ 0.15
FOXP1-213ENST00000493010 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
FOXP1-213ENST00000493010 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
FOXP1-213ENST00000493010 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
FOXP1-213ENST00000493010 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
FOXP1-213ENST00000493010 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
FOXP1-213ENST00000493010 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
FOXP1-213ENST00000493010 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
FOXP1-213ENST00000493010 WDR62O43379 1518 aa15.86■□□□□ 0.13
FOXP1-213ENST00000493010 FOXD1Q16676 465 aa15.85■□□□□ 0.13
FOXP1-213ENST00000493010 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
FOXP1-213ENST00000493010 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
FOXP1-213ENST00000493010 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
FOXP1-213ENST00000493010 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
FOXP1-213ENST00000493010 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
FOXP1-213ENST00000493010 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
FOXP1-213ENST00000493010 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
FOXP1-213ENST00000493010 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
FOXP1-213ENST00000493010 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
FOXP1-213ENST00000493010 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
FOXP1-213ENST00000493010 CUX1P39880 1505 aa15.47■□□□□ 0.07
FOXP1-213ENST00000493010 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
FOXP1-213ENST00000493010 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
FOXP1-213ENST00000493010 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
FOXP1-213ENST00000493010 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
FOXP1-213ENST00000493010 SOGA1O94964 1423 aa15.43■□□□□ 0.06
FOXP1-213ENST00000493010 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
FOXP1-213ENST00000493010 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
FOXP1-213ENST00000493010 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
FOXP1-213ENST00000493010 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
FOXP1-213ENST00000493010 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.05
FOXP1-213ENST00000493010 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
FOXP1-213ENST00000493010 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
FOXP1-213ENST00000493010 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
FOXP1-213ENST00000493010 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
FOXP1-213ENST00000493010 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
FOXP1-213ENST00000493010 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
FOXP1-213ENST00000493010 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
FOXP1-213ENST00000493010 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
FOXP1-213ENST00000493010 SNAPC4Q5SXM2 1469 aa15.24■□□□□ 0.03
FOXP1-213ENST00000493010 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
FOXP1-213ENST00000493010 CHD1O14646 1710 aa15.23■□□□□ 0.03
FOXP1-213ENST00000493010 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
FOXP1-213ENST00000493010 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
FOXP1-213ENST00000493010 FBLN2P98095 1184 aa15.16■□□□□ 0.02
FOXP1-213ENST00000493010 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
FOXP1-213ENST00000493010 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
FOXP1-213ENST00000493010 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
FOXP1-213ENST00000493010 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
FOXP1-213ENST00000493010 ARHGEF11O15085 1522 aa15.09■□□□□ 0.01
FOXP1-213ENST00000493010 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
FOXP1-213ENST00000493010 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
FOXP1-213ENST00000493010 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
FOXP1-213ENST00000493010 KIF27Q86VH2 1401 aa15.08■□□□□ 0
FOXP1-213ENST00000493010 GRIN2AQ12879 1464 aa15.08■□□□□ 0
FOXP1-213ENST00000493010 NUP160Q12769 1436 aa15.02■□□□□ -0
FOXP1-213ENST00000493010 CUL7Q14999 1698 aa15.02□□□□□ -0.01
FOXP1-213ENST00000493010 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
FOXP1-213ENST00000493010 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
FOXP1-213ENST00000493010 IGF1RP08069 1367 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms