RNA–Protein interactions for RNA: ENST00000492898.1

DENND4B-211, Transcript of DENN domain containing 4B, humanhuman

TSL 5

Gene DENND4B, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-211ENST00000492898 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
DENND4B-211ENST00000492898 ABCC9O60706 1549 aa31.24■■■□□ 2.59
DENND4B-211ENST00000492898 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
DENND4B-211ENST00000492898 CCDC180Q9P1Z9 1646 aa30.17■■■□□ 2.42
DENND4B-211ENST00000492898 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
DENND4B-211ENST00000492898 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.227e-7■■■■□ 25.6
DENND4B-211ENST00000492898 NACADO15069 1562 aa28.75■■■□□ 2.19
DENND4B-211ENST00000492898 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
DENND4B-211ENST00000492898 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
DENND4B-211ENST00000492898 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
DENND4B-211ENST00000492898 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
DENND4B-211ENST00000492898 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
DENND4B-211ENST00000492898 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
DENND4B-211ENST00000492898 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
DENND4B-211ENST00000492898 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
DENND4B-211ENST00000492898 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
DENND4B-211ENST00000492898 SCRIBQ14160 1630 aa27.52■■■□□ 2
DENND4B-211ENST00000492898 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
DENND4B-211ENST00000492898 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
DENND4B-211ENST00000492898 CUX2O14529 1486 aa27.24■■□□□ 1.95
DENND4B-211ENST00000492898 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
DENND4B-211ENST00000492898 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
DENND4B-211ENST00000492898 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
DENND4B-211ENST00000492898 NESP48681 1621 aa26.63■■□□□ 1.85
DENND4B-211ENST00000492898 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
DENND4B-211ENST00000492898 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
DENND4B-211ENST00000492898 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
DENND4B-211ENST00000492898 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
DENND4B-211ENST00000492898 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
DENND4B-211ENST00000492898 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
DENND4B-211ENST00000492898 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
DENND4B-211ENST00000492898 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
DENND4B-211ENST00000492898 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
DENND4B-211ENST00000492898 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.74
DENND4B-211ENST00000492898 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
DENND4B-211ENST00000492898 WDR62O43379 1518 aa25.89■■□□□ 1.74
DENND4B-211ENST00000492898 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
DENND4B-211ENST00000492898 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
DENND4B-211ENST00000492898 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
DENND4B-211ENST00000492898 RIMBP3CA6NJZ7 1639 aa25.67■■□□□ 1.7
DENND4B-211ENST00000492898 RIMBP3BA6NNM3 1639 aa25.67■■□□□ 1.7
DENND4B-211ENST00000492898 RIMBP3Q9UFD9 1639 aa25.67■■□□□ 1.7
DENND4B-211ENST00000492898 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
DENND4B-211ENST00000492898 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
DENND4B-211ENST00000492898 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
DENND4B-211ENST00000492898 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
DENND4B-211ENST00000492898 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
DENND4B-211ENST00000492898 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
DENND4B-211ENST00000492898 CFTRP13569 1480 aa25.28■■□□□ 1.64
DENND4B-211ENST00000492898 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
DENND4B-211ENST00000492898 WIZO95785 1651 aa25.27■■□□□ 1.64
DENND4B-211ENST00000492898 TRHP20396 242 aaPredicted RBP25.24■■□□□ 1.63
DENND4B-211ENST00000492898 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
DENND4B-211ENST00000492898 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
DENND4B-211ENST00000492898 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
DENND4B-211ENST00000492898 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
DENND4B-211ENST00000492898 CHD1O14646 1710 aa24.98■■□□□ 1.59
DENND4B-211ENST00000492898 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
DENND4B-211ENST00000492898 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
DENND4B-211ENST00000492898 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.579e-9■■■■■ 64
DENND4B-211ENST00000492898 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
DENND4B-211ENST00000492898 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
DENND4B-211ENST00000492898 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
DENND4B-211ENST00000492898 FBLN2P98095 1184 aa24.75■■□□□ 1.55
DENND4B-211ENST00000492898 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
DENND4B-211ENST00000492898 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
DENND4B-211ENST00000492898 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
DENND4B-211ENST00000492898 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
DENND4B-211ENST00000492898 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
DENND4B-211ENST00000492898 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
DENND4B-211ENST00000492898 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
DENND4B-211ENST00000492898 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
DENND4B-211ENST00000492898 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
DENND4B-211ENST00000492898 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
DENND4B-211ENST00000492898 ILDR1Q86SU0 546 aaPredicted RBP24.43■■□□□ 1.5
DENND4B-211ENST00000492898 SOGA1O94964 1423 aa24.38■■□□□ 1.49
DENND4B-211ENST00000492898 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
DENND4B-211ENST00000492898 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
DENND4B-211ENST00000492898 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
DENND4B-211ENST00000492898 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
DENND4B-211ENST00000492898 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
DENND4B-211ENST00000492898 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
DENND4B-211ENST00000492898 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
DENND4B-211ENST00000492898 KIF13AQ9H1H9 1805 aa24.24■■□□□ 1.47
DENND4B-211ENST00000492898 KDM4FA0A1W2PPD8 638 aa24.2■■□□□ 1.46
DENND4B-211ENST00000492898 CUX1P39880 1505 aa24.16■■□□□ 1.46
DENND4B-211ENST00000492898 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
DENND4B-211ENST00000492898 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
DENND4B-211ENST00000492898 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
DENND4B-211ENST00000492898 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
DENND4B-211ENST00000492898 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
DENND4B-211ENST00000492898 NUP160Q12769 1436 aa24.01■■□□□ 1.43
DENND4B-211ENST00000492898 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
DENND4B-211ENST00000492898 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
DENND4B-211ENST00000492898 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
DENND4B-211ENST00000492898 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
DENND4B-211ENST00000492898 DIP2BQ9P265 1576 aa23.91■■□□□ 1.42
DENND4B-211ENST00000492898 KDM6BO15054 1643 aa23.87■■□□□ 1.41
DENND4B-211ENST00000492898 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
DENND4B-211ENST00000492898 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms