RNA–Protein interactions for RNA: ENST00000492372.1

DKC1-212, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-212ENST00000492372 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
DKC1-212ENST00000492372 ABCC9O60706 1549 aa22.33■■□□□ 1.17
DKC1-212ENST00000492372 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
DKC1-212ENST00000492372 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
DKC1-212ENST00000492372 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
DKC1-212ENST00000492372 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
DKC1-212ENST00000492372 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
DKC1-212ENST00000492372 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
DKC1-212ENST00000492372 NACADO15069 1562 aa20.53■□□□□ 0.88
DKC1-212ENST00000492372 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
DKC1-212ENST00000492372 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
DKC1-212ENST00000492372 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
DKC1-212ENST00000492372 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
DKC1-212ENST00000492372 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
DKC1-212ENST00000492372 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
DKC1-212ENST00000492372 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
DKC1-212ENST00000492372 CUX2O14529 1486 aa19.63■□□□□ 0.73
DKC1-212ENST00000492372 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
DKC1-212ENST00000492372 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
DKC1-212ENST00000492372 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
DKC1-212ENST00000492372 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
DKC1-212ENST00000492372 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
DKC1-212ENST00000492372 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
DKC1-212ENST00000492372 NESP48681 1621 aa18.95■□□□□ 0.62
DKC1-212ENST00000492372 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
DKC1-212ENST00000492372 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
DKC1-212ENST00000492372 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
DKC1-212ENST00000492372 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
DKC1-212ENST00000492372 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
DKC1-212ENST00000492372 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
DKC1-212ENST00000492372 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
DKC1-212ENST00000492372 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
DKC1-212ENST00000492372 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
DKC1-212ENST00000492372 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
DKC1-212ENST00000492372 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
DKC1-212ENST00000492372 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
DKC1-212ENST00000492372 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
DKC1-212ENST00000492372 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
DKC1-212ENST00000492372 WDR62O43379 1518 aa18.49■□□□□ 0.55
DKC1-212ENST00000492372 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
DKC1-212ENST00000492372 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
DKC1-212ENST00000492372 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
DKC1-212ENST00000492372 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
DKC1-212ENST00000492372 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
DKC1-212ENST00000492372 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
DKC1-212ENST00000492372 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
DKC1-212ENST00000492372 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
DKC1-212ENST00000492372 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
DKC1-212ENST00000492372 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
DKC1-212ENST00000492372 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
DKC1-212ENST00000492372 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
DKC1-212ENST00000492372 CHD1O14646 1710 aa17.97■□□□□ 0.47
DKC1-212ENST00000492372 ZNF608Q9ULD9 1512 aaPredicted RBP17.96■□□□□ 0.47
DKC1-212ENST00000492372 CFTRP13569 1480 aa17.91■□□□□ 0.46
DKC1-212ENST00000492372 WIZO95785 1651 aa17.89■□□□□ 0.45
DKC1-212ENST00000492372 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
DKC1-212ENST00000492372 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
DKC1-212ENST00000492372 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
DKC1-212ENST00000492372 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
DKC1-212ENST00000492372 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
DKC1-212ENST00000492372 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
DKC1-212ENST00000492372 FBLN2P98095 1184 aa17.67■□□□□ 0.42
DKC1-212ENST00000492372 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
DKC1-212ENST00000492372 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.424e-18■■□□□ 14.1
DKC1-212ENST00000492372 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
DKC1-212ENST00000492372 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
DKC1-212ENST00000492372 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
DKC1-212ENST00000492372 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
DKC1-212ENST00000492372 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
DKC1-212ENST00000492372 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
DKC1-212ENST00000492372 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
DKC1-212ENST00000492372 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
DKC1-212ENST00000492372 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
DKC1-212ENST00000492372 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
DKC1-212ENST00000492372 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
DKC1-212ENST00000492372 MAGI1Q96QZ7 1491 aaPredicted RBP17.38■□□□□ 0.37
DKC1-212ENST00000492372 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
DKC1-212ENST00000492372 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
DKC1-212ENST00000492372 KDM4FA0A1W2PPD8 638 aa17.36■□□□□ 0.37
DKC1-212ENST00000492372 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
DKC1-212ENST00000492372 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
DKC1-212ENST00000492372 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
DKC1-212ENST00000492372 SOGA1O94964 1423 aa17.3■□□□□ 0.36
DKC1-212ENST00000492372 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
DKC1-212ENST00000492372 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
DKC1-212ENST00000492372 KDM6BO15054 1643 aa17.21■□□□□ 0.35
DKC1-212ENST00000492372 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
DKC1-212ENST00000492372 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
DKC1-212ENST00000492372 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
DKC1-212ENST00000492372 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
DKC1-212ENST00000492372 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
DKC1-212ENST00000492372 HECW2Q9P2P5 1572 aa17.14■□□□□ 0.33
DKC1-212ENST00000492372 DIP2BQ9P265 1576 aa17.13■□□□□ 0.33
DKC1-212ENST00000492372 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
DKC1-212ENST00000492372 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
DKC1-212ENST00000492372 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
DKC1-212ENST00000492372 CUX1P39880 1505 aa17.06■□□□□ 0.32
DKC1-212ENST00000492372 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
DKC1-212ENST00000492372 ADGRL1O94910 1474 aa17.05■□□□□ 0.32
DKC1-212ENST00000492372 NUP160Q12769 1436 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms