RNA–Protein interactions for RNA: ENST00000491554.6

IVD-207, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 3

Gene IVD, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-207ENST00000491554 NISCHQ9Y2I1 1504 aa35.98■■■■□ 3.35
IVD-207ENST00000491554 ABCC9O60706 1549 aa33.41■■■□□ 2.94
IVD-207ENST00000491554 CCDC180Q9P1Z9 1646 aa32.56■■■□□ 2.8
IVD-207ENST00000491554 DNAJC5BQ9UF47 199 aa32.08■■■□□ 2.73
IVD-207ENST00000491554 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
IVD-207ENST00000491554 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
IVD-207ENST00000491554 NACADO15069 1562 aa31.01■■■□□ 2.56
IVD-207ENST00000491554 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
IVD-207ENST00000491554 UNC13AQ9UPW8 1703 aa30.65■■■□□ 2.5
IVD-207ENST00000491554 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
IVD-207ENST00000491554 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
IVD-207ENST00000491554 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
IVD-207ENST00000491554 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
IVD-207ENST00000491554 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
IVD-207ENST00000491554 DNAJC5Q9H3Z4 198 aa30.02■■■□□ 2.4
IVD-207ENST00000491554 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
IVD-207ENST00000491554 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
IVD-207ENST00000491554 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
IVD-207ENST00000491554 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
IVD-207ENST00000491554 CUX2O14529 1486 aa29.1■■■□□ 2.25
IVD-207ENST00000491554 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
IVD-207ENST00000491554 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
IVD-207ENST00000491554 NESP48681 1621 aa28.48■■■□□ 2.15
IVD-207ENST00000491554 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
IVD-207ENST00000491554 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
IVD-207ENST00000491554 HMGXB3Q12766 1538 aa28.35■■■□□ 2.13
IVD-207ENST00000491554 SMARCA2P51531 1590 aa28.33■■■□□ 2.12
IVD-207ENST00000491554 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
IVD-207ENST00000491554 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
IVD-207ENST00000491554 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
IVD-207ENST00000491554 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
IVD-207ENST00000491554 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
IVD-207ENST00000491554 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.08
IVD-207ENST00000491554 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
IVD-207ENST00000491554 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
IVD-207ENST00000491554 MRC2Q9UBG0 1479 aa27.81■■■□□ 2.04
IVD-207ENST00000491554 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
IVD-207ENST00000491554 WDR62O43379 1518 aa27.74■■■□□ 2.03
IVD-207ENST00000491554 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
IVD-207ENST00000491554 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
IVD-207ENST00000491554 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
IVD-207ENST00000491554 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
IVD-207ENST00000491554 RIMBP3CA6NJZ7 1639 aa27.35■■□□□ 1.97
IVD-207ENST00000491554 RIMBP3BA6NNM3 1639 aa27.35■■□□□ 1.97
IVD-207ENST00000491554 RIMBP3Q9UFD9 1639 aa27.35■■□□□ 1.97
IVD-207ENST00000491554 WIZO95785 1651 aa27.33■■□□□ 1.97
IVD-207ENST00000491554 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
IVD-207ENST00000491554 CFTRP13569 1480 aa27.27■■□□□ 1.96
IVD-207ENST00000491554 ARHGEF11O15085 1522 aa27.2■■□□□ 1.94
IVD-207ENST00000491554 CYB5RLQ6IPT4 315 aa27.1■■□□□ 1.93
IVD-207ENST00000491554 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
IVD-207ENST00000491554 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
IVD-207ENST00000491554 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
IVD-207ENST00000491554 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
IVD-207ENST00000491554 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
IVD-207ENST00000491554 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
IVD-207ENST00000491554 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
IVD-207ENST00000491554 AEBP2Q6ZN18 517 aaPredicted RBP26.84■■□□□ 1.89
IVD-207ENST00000491554 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
IVD-207ENST00000491554 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
IVD-207ENST00000491554 CHD1O14646 1710 aa26.77■■□□□ 1.88
IVD-207ENST00000491554 FBLN2P98095 1184 aa26.75■■□□□ 1.87
IVD-207ENST00000491554 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.875e-7■■■■■ 27.6
IVD-207ENST00000491554 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
IVD-207ENST00000491554 CCDC88BA6NC98 1476 aa26.67■■□□□ 1.86
IVD-207ENST00000491554 DNMBPQ6XZF7 1577 aa26.64■■□□□ 1.86
IVD-207ENST00000491554 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
IVD-207ENST00000491554 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
IVD-207ENST00000491554 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
IVD-207ENST00000491554 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
IVD-207ENST00000491554 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
IVD-207ENST00000491554 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
IVD-207ENST00000491554 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
IVD-207ENST00000491554 SOGA1O94964 1423 aa26.4■■□□□ 1.82
IVD-207ENST00000491554 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
IVD-207ENST00000491554 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
IVD-207ENST00000491554 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
IVD-207ENST00000491554 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
IVD-207ENST00000491554 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
IVD-207ENST00000491554 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
IVD-207ENST00000491554 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
IVD-207ENST00000491554 CUX1P39880 1505 aa26.09■■□□□ 1.77
IVD-207ENST00000491554 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
IVD-207ENST00000491554 PBRM1Q86U86 1689 aa26.03■■□□□ 1.76
IVD-207ENST00000491554 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
IVD-207ENST00000491554 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
IVD-207ENST00000491554 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
IVD-207ENST00000491554 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.74
IVD-207ENST00000491554 KIF13AQ9H1H9 1805 aa25.86■■□□□ 1.73
IVD-207ENST00000491554 NUP160Q12769 1436 aa25.85■■□□□ 1.73
IVD-207ENST00000491554 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
IVD-207ENST00000491554 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
IVD-207ENST00000491554 ADAMTS12P58397 1594 aa25.76■■□□□ 1.71
IVD-207ENST00000491554 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
IVD-207ENST00000491554 KDM4FA0A1W2PPD8 638 aa25.72■■□□□ 1.71
IVD-207ENST00000491554 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
IVD-207ENST00000491554 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
IVD-207ENST00000491554 ABCC10Q5T3U5 1492 aa25.68■■□□□ 1.7
IVD-207ENST00000491554 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
IVD-207ENST00000491554 NPM1P06748 294 aaKnown RBP eCLIP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms