RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
SDHB-208ENST00000491274 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
SDHB-208ENST00000491274 NISCHQ9Y2I1 1504 aa15.85■□□□□ 0.13
SDHB-208ENST00000491274 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
SDHB-208ENST00000491274 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
SDHB-208ENST00000491274 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
SDHB-208ENST00000491274 ABCC9O60706 1549 aa13.92□□□□□ -0.18
SDHB-208ENST00000491274 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
SDHB-208ENST00000491274 FOXD1Q16676 465 aa13.89□□□□□ -0.19
SDHB-208ENST00000491274 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
SDHB-208ENST00000491274 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
SDHB-208ENST00000491274 NACADO15069 1562 aa13.25□□□□□ -0.29
SDHB-208ENST00000491274 ADRA2BP18089 450 aa13.21□□□□□ -0.29
SDHB-208ENST00000491274 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
SDHB-208ENST00000491274 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SDHB-208ENST00000491274 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
SDHB-208ENST00000491274 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
SDHB-208ENST00000491274 MSH5O43196 834 aa13.03□□□□□ -0.32
SDHB-208ENST00000491274 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
SDHB-208ENST00000491274 KCNA4P22459 653 aa13□□□□□ -0.33
SDHB-208ENST00000491274 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
SDHB-208ENST00000491274 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
SDHB-208ENST00000491274 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
SDHB-208ENST00000491274 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
SDHB-208ENST00000491274 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
SDHB-208ENST00000491274 UNC13AQ9UPW8 1703 aa12.77□□□□□ -0.36
SDHB-208ENST00000491274 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
SDHB-208ENST00000491274 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
SDHB-208ENST00000491274 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
SDHB-208ENST00000491274 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
SDHB-208ENST00000491274 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
SDHB-208ENST00000491274 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
SDHB-208ENST00000491274 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
SDHB-208ENST00000491274 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
SDHB-208ENST00000491274 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
SDHB-208ENST00000491274 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
SDHB-208ENST00000491274 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
SDHB-208ENST00000491274 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
SDHB-208ENST00000491274 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
SDHB-208ENST00000491274 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
SDHB-208ENST00000491274 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
SDHB-208ENST00000491274 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
SDHB-208ENST00000491274 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.46
SDHB-208ENST00000491274 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
SDHB-208ENST00000491274 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
SDHB-208ENST00000491274 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
SDHB-208ENST00000491274 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
SDHB-208ENST00000491274 ZBTB22O15209 634 aa12.04□□□□□ -0.48
SDHB-208ENST00000491274 WIZO95785 1651 aa12.03□□□□□ -0.48
SDHB-208ENST00000491274 NESP48681 1621 aa12□□□□□ -0.49
SDHB-208ENST00000491274 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
SDHB-208ENST00000491274 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
SDHB-208ENST00000491274 PDS5BQ9NTI5 1447 aa11.95□□□□□ -0.5
SDHB-208ENST00000491274 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
SDHB-208ENST00000491274 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
SDHB-208ENST00000491274 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
SDHB-208ENST00000491274 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
SDHB-208ENST00000491274 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
SDHB-208ENST00000491274 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
SDHB-208ENST00000491274 CUX2O14529 1486 aa11.83□□□□□ -0.52
SDHB-208ENST00000491274 CFTRP13569 1480 aa11.83□□□□□ -0.52
SDHB-208ENST00000491274 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
SDHB-208ENST00000491274 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
SDHB-208ENST00000491274 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
SDHB-208ENST00000491274 MRC2Q9UBG0 1479 aa11.76□□□□□ -0.53
SDHB-208ENST00000491274 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.54
SDHB-208ENST00000491274 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
SDHB-208ENST00000491274 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
SDHB-208ENST00000491274 WDR62O43379 1518 aa11.65□□□□□ -0.54
SDHB-208ENST00000491274 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
SDHB-208ENST00000491274 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
SDHB-208ENST00000491274 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
SDHB-208ENST00000491274 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
SDHB-208ENST00000491274 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
SDHB-208ENST00000491274 SOGA1O94964 1423 aa11.52□□□□□ -0.56
SDHB-208ENST00000491274 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
SDHB-208ENST00000491274 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
SDHB-208ENST00000491274 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
SDHB-208ENST00000491274 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
SDHB-208ENST00000491274 FBLN2P98095 1184 aa11.49□□□□□ -0.57
SDHB-208ENST00000491274 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
SDHB-208ENST00000491274 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
SDHB-208ENST00000491274 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
SDHB-208ENST00000491274 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.578e-11■■■■□ 26.1
SDHB-208ENST00000491274 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
SDHB-208ENST00000491274 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
SDHB-208ENST00000491274 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.57
SDHB-208ENST00000491274 CUX1P39880 1505 aa11.45□□□□□ -0.58
SDHB-208ENST00000491274 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SDHB-208ENST00000491274 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
SDHB-208ENST00000491274 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
SDHB-208ENST00000491274 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
SDHB-208ENST00000491274 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
SDHB-208ENST00000491274 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
SDHB-208ENST00000491274 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
SDHB-208ENST00000491274 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
SDHB-208ENST00000491274 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
SDHB-208ENST00000491274 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
SDHB-208ENST00000491274 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
SDHB-208ENST00000491274 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms