RNA–Protein interactions for RNA: ENST00000490468.5

PCNT-208, Transcript of pericentrin, humanhuman

TSL 5

Gene PCNT, Length 1,415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-208ENST00000490468 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
PCNT-208ENST00000490468 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
PCNT-208ENST00000490468 ABCC9O60706 1549 aa27.89■■■□□ 2.05
PCNT-208ENST00000490468 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
PCNT-208ENST00000490468 NACADO15069 1562 aa26.64■■□□□ 1.86
PCNT-208ENST00000490468 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
PCNT-208ENST00000490468 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
PCNT-208ENST00000490468 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
PCNT-208ENST00000490468 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.79
PCNT-208ENST00000490468 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
PCNT-208ENST00000490468 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
PCNT-208ENST00000490468 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
PCNT-208ENST00000490468 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
PCNT-208ENST00000490468 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
PCNT-208ENST00000490468 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
PCNT-208ENST00000490468 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
PCNT-208ENST00000490468 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
PCNT-208ENST00000490468 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
PCNT-208ENST00000490468 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
PCNT-208ENST00000490468 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
PCNT-208ENST00000490468 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
PCNT-208ENST00000490468 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
PCNT-208ENST00000490468 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
PCNT-208ENST00000490468 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
PCNT-208ENST00000490468 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
PCNT-208ENST00000490468 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
PCNT-208ENST00000490468 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
PCNT-208ENST00000490468 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.46
PCNT-208ENST00000490468 WIZO95785 1651 aa24.1■■□□□ 1.45
PCNT-208ENST00000490468 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
PCNT-208ENST00000490468 NESP48681 1621 aa24.06■■□□□ 1.44
PCNT-208ENST00000490468 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
PCNT-208ENST00000490468 CUX2O14529 1486 aa23.95■■□□□ 1.42
PCNT-208ENST00000490468 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
PCNT-208ENST00000490468 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
PCNT-208ENST00000490468 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
PCNT-208ENST00000490468 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.4
PCNT-208ENST00000490468 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
PCNT-208ENST00000490468 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
PCNT-208ENST00000490468 CFTRP13569 1480 aa23.63■■□□□ 1.37
PCNT-208ENST00000490468 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
PCNT-208ENST00000490468 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
PCNT-208ENST00000490468 WDR62O43379 1518 aa23.56■■□□□ 1.36
PCNT-208ENST00000490468 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
PCNT-208ENST00000490468 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
PCNT-208ENST00000490468 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
PCNT-208ENST00000490468 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
PCNT-208ENST00000490468 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
PCNT-208ENST00000490468 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
PCNT-208ENST00000490468 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
PCNT-208ENST00000490468 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
PCNT-208ENST00000490468 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
PCNT-208ENST00000490468 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
PCNT-208ENST00000490468 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
PCNT-208ENST00000490468 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
PCNT-208ENST00000490468 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
PCNT-208ENST00000490468 CUX1P39880 1505 aa22.88■■□□□ 1.25
PCNT-208ENST00000490468 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
PCNT-208ENST00000490468 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
PCNT-208ENST00000490468 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
PCNT-208ENST00000490468 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.242e-6■■■■■ 31.2
PCNT-208ENST00000490468 SOGA1O94964 1423 aa22.79■■□□□ 1.24
PCNT-208ENST00000490468 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
PCNT-208ENST00000490468 WDR97A6NE52 1622 aa22.78■■□□□ 1.24
PCNT-208ENST00000490468 CHD1O14646 1710 aa22.72■■□□□ 1.23
PCNT-208ENST00000490468 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
PCNT-208ENST00000490468 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
PCNT-208ENST00000490468 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
PCNT-208ENST00000490468 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
PCNT-208ENST00000490468 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
PCNT-208ENST00000490468 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
PCNT-208ENST00000490468 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
PCNT-208ENST00000490468 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
PCNT-208ENST00000490468 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
PCNT-208ENST00000490468 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
PCNT-208ENST00000490468 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
PCNT-208ENST00000490468 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
PCNT-208ENST00000490468 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
PCNT-208ENST00000490468 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
PCNT-208ENST00000490468 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
PCNT-208ENST00000490468 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
PCNT-208ENST00000490468 FBLN2P98095 1184 aa22.53■■□□□ 1.2
PCNT-208ENST00000490468 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
PCNT-208ENST00000490468 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
PCNT-208ENST00000490468 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
PCNT-208ENST00000490468 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
PCNT-208ENST00000490468 ADAMTS12P58397 1594 aa22.39■■□□□ 1.17
PCNT-208ENST00000490468 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
PCNT-208ENST00000490468 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
PCNT-208ENST00000490468 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
PCNT-208ENST00000490468 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
PCNT-208ENST00000490468 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
PCNT-208ENST00000490468 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
PCNT-208ENST00000490468 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
PCNT-208ENST00000490468 NUP160Q12769 1436 aa22.23■■□□□ 1.15
PCNT-208ENST00000490468 EEA1Q15075 1411 aa22.19■■□□□ 1.14
PCNT-208ENST00000490468 SHROOM2Q13796 1616 aa22.14■■□□□ 1.14
PCNT-208ENST00000490468 IGF1RP08069 1367 aa22.12■■□□□ 1.13
PCNT-208ENST00000490468 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
PCNT-208ENST00000490468 CUL7Q14999 1698 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms