RNA–Protein interactions for RNA: ENST00000488967.5

ACTA2-206, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 2

Gene ACTA2, Length 762 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-206ENST00000488967 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
ACTA2-206ENST00000488967 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
ACTA2-206ENST00000488967 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
ACTA2-206ENST00000488967 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
ACTA2-206ENST00000488967 ABCC9O60706 1549 aa25.11■■□□□ 1.61
ACTA2-206ENST00000488967 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
ACTA2-206ENST00000488967 NACADO15069 1562 aa24.04■■□□□ 1.44
ACTA2-206ENST00000488967 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
ACTA2-206ENST00000488967 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
ACTA2-206ENST00000488967 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
ACTA2-206ENST00000488967 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
ACTA2-206ENST00000488967 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
ACTA2-206ENST00000488967 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
ACTA2-206ENST00000488967 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
ACTA2-206ENST00000488967 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
ACTA2-206ENST00000488967 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
ACTA2-206ENST00000488967 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
ACTA2-206ENST00000488967 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
ACTA2-206ENST00000488967 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
ACTA2-206ENST00000488967 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
ACTA2-206ENST00000488967 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
ACTA2-206ENST00000488967 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
ACTA2-206ENST00000488967 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
ACTA2-206ENST00000488967 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
ACTA2-206ENST00000488967 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
ACTA2-206ENST00000488967 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
ACTA2-206ENST00000488967 SMARCA2P51531 1590 aa22.08■■□□□ 1.13
ACTA2-206ENST00000488967 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
ACTA2-206ENST00000488967 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
ACTA2-206ENST00000488967 BAZ1BQ9UIG0 1483 aaKnown RBP21.89■■□□□ 1.09
ACTA2-206ENST00000488967 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
ACTA2-206ENST00000488967 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
ACTA2-206ENST00000488967 CUX2O14529 1486 aa21.66■■□□□ 1.06
ACTA2-206ENST00000488967 NESP48681 1621 aa21.63■■□□□ 1.05
ACTA2-206ENST00000488967 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
ACTA2-206ENST00000488967 WIZO95785 1651 aa21.6■■□□□ 1.05
ACTA2-206ENST00000488967 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
ACTA2-206ENST00000488967 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
ACTA2-206ENST00000488967 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
ACTA2-206ENST00000488967 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
ACTA2-206ENST00000488967 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
ACTA2-206ENST00000488967 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
ACTA2-206ENST00000488967 KIF21AQ7Z4S6 1674 aa21.36■■□□□ 1.01
ACTA2-206ENST00000488967 CFTRP13569 1480 aa21.32■■□□□ 1
ACTA2-206ENST00000488967 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
ACTA2-206ENST00000488967 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
ACTA2-206ENST00000488967 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
ACTA2-206ENST00000488967 WDR62O43379 1518 aa21.2■□□□□ 0.98
ACTA2-206ENST00000488967 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
ACTA2-206ENST00000488967 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
ACTA2-206ENST00000488967 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
ACTA2-206ENST00000488967 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
ACTA2-206ENST00000488967 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
ACTA2-206ENST00000488967 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
ACTA2-206ENST00000488967 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
ACTA2-206ENST00000488967 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
ACTA2-206ENST00000488967 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
ACTA2-206ENST00000488967 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
ACTA2-206ENST00000488967 FOXD1Q16676 465 aa20.71■□□□□ 0.91
ACTA2-206ENST00000488967 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
ACTA2-206ENST00000488967 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
ACTA2-206ENST00000488967 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
ACTA2-206ENST00000488967 SOGA1O94964 1423 aa20.59■□□□□ 0.89
ACTA2-206ENST00000488967 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
ACTA2-206ENST00000488967 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
ACTA2-206ENST00000488967 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
ACTA2-206ENST00000488967 CUX1P39880 1505 aa20.53■□□□□ 0.88
ACTA2-206ENST00000488967 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
ACTA2-206ENST00000488967 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
ACTA2-206ENST00000488967 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
ACTA2-206ENST00000488967 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
ACTA2-206ENST00000488967 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
ACTA2-206ENST00000488967 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
ACTA2-206ENST00000488967 FBLN2P98095 1184 aa20.37■□□□□ 0.85
ACTA2-206ENST00000488967 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
ACTA2-206ENST00000488967 CHD1O14646 1710 aa20.36■□□□□ 0.85
ACTA2-206ENST00000488967 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
ACTA2-206ENST00000488967 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
ACTA2-206ENST00000488967 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.85
ACTA2-206ENST00000488967 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
ACTA2-206ENST00000488967 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
ACTA2-206ENST00000488967 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
ACTA2-206ENST00000488967 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
ACTA2-206ENST00000488967 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
ACTA2-206ENST00000488967 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
ACTA2-206ENST00000488967 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
ACTA2-206ENST00000488967 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
ACTA2-206ENST00000488967 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
ACTA2-206ENST00000488967 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
ACTA2-206ENST00000488967 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
ACTA2-206ENST00000488967 CLASP1Q7Z460 1538 aa20.19■□□□□ 0.82
ACTA2-206ENST00000488967 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
ACTA2-206ENST00000488967 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
ACTA2-206ENST00000488967 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
ACTA2-206ENST00000488967 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
ACTA2-206ENST00000488967 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
ACTA2-206ENST00000488967 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
ACTA2-206ENST00000488967 NUP160Q12769 1436 aa20.04■□□□□ 0.8
ACTA2-206ENST00000488967 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
ACTA2-206ENST00000488967 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms