RNA–Protein interactions for RNA: ENST00000486523.1

TNK2-220, Transcript of tyrosine kinase non receptor 2, humanhuman

TSL 3

Gene TNK2, Length 300 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNK2-220ENST00000486523 SF3B1O75533 1304 aaKnown RBP eCLIP22.62■■□□□ 1.213e-6■■■■■ 72.6
TNK2-220ENST00000486523 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.41■□□□□ 0.77e-7■■■■■ 71.6
TNK2-220ENST00000486523 GTF2F1P35269 517 aaKnown RBP eCLIP22.79■■□□□ 1.245e-8■■■■■ 58.5
TNK2-220ENST00000486523 LSM11P83369 360 aaKnown RBP eCLIP17.99■□□□□ 0.473e-11■■■■■ 40.1
TNK2-220ENST00000486523 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.11■■□□□ 1.294e-6■■■■■ 36.3
TNK2-220ENST00000486523 FUSP35637 526 aaKnown RBP eCLIP13.77□□□□□ -0.213e-12■■■■■ 34.8
TNK2-220ENST00000486523 SF3B4Q15427 424 aaKnown RBP eCLIP18.82■□□□□ 0.63e-9■■■■■ 30.6
TNK2-220ENST00000486523 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.43■■□□□ 1.58e-7■■■■■ 29.9
TNK2-220ENST00000486523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.8■■■□□ 2.685e-7■■■■■ 29.7
TNK2-220ENST00000486523 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.24■□□□□ 0.352e-9■■■■■ 28.2
TNK2-220ENST00000486523 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.44■■□□□ 1.023e-6■■■■■ 26.8
TNK2-220ENST00000486523 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.48■■□□□ 1.032e-8■■■■□ 24.5
TNK2-220ENST00000486523 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.36■□□□□ 0.698e-7■■■■□ 24.5
TNK2-220ENST00000486523 EWSR1Q01844 656 aaKnown RBP eCLIP15.1■□□□□ 0.014e-7■■■■□ 22.4
TNK2-220ENST00000486523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■■■■□ 20.3
TNK2-220ENST00000486523 FKBP4Q02790 459 aaKnown RBP eCLIP26.55■■□□□ 1.841e-6■■■■□ 19.6
TNK2-220ENST00000486523 SAFB2Q14151 953 aaKnown RBP eCLIP29.89■■■□□ 2.384e-6■■■□□ 19
TNK2-220ENST00000486523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.36■■□□□ 1.179e-7■■■□□ 18.3
TNK2-220ENST00000486523 NONOQ15233 471 aaKnown RBP eCLIP23.46■■□□□ 1.352e-6■■■□□ 17.8
TNK2-220ENST00000486523 PRPF4O43172 522 aaKnown RBP eCLIP19.69■□□□□ 0.744e-10■■■□□ 17.2
TNK2-220ENST00000486523 PPIGQ13427 754 aaKnown RBP eCLIP23.69■■□□□ 1.386e-7■■■□□ 15.6
TNK2-220ENST00000486523 PCBP2Q15366 365 aaKnown RBP eCLIP19.47■□□□□ 0.714e-6■■■□□ 15
TNK2-220ENST00000486523 GRSF1Q12849 480 aaKnown RBP eCLIP21.79■■□□□ 1.083e-7■■□□□ 13.6
TNK2-220ENST00000486523 NKRFO15226 690 aaKnown RBP eCLIP23.93■■□□□ 1.423e-7■■□□□ 11.5
Retrieved 24 of 24 RNA–protein pairs in 6.5 ms