RNA–Protein interactions for RNA: ENST00000486435.1

C3orf33-204, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 5

Gene C3orf33, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-204ENST00000486435 NISCHQ9Y2I1 1504 aa30.76■■■□□ 2.51
C3orf33-204ENST00000486435 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
C3orf33-204ENST00000486435 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
C3orf33-204ENST00000486435 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
C3orf33-204ENST00000486435 ABCC9O60706 1549 aa26.91■■□□□ 1.9
C3orf33-204ENST00000486435 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
C3orf33-204ENST00000486435 NACADO15069 1562 aa25.79■■□□□ 1.72
C3orf33-204ENST00000486435 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
C3orf33-204ENST00000486435 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
C3orf33-204ENST00000486435 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
C3orf33-204ENST00000486435 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
C3orf33-204ENST00000486435 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
C3orf33-204ENST00000486435 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
C3orf33-204ENST00000486435 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
C3orf33-204ENST00000486435 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
C3orf33-204ENST00000486435 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
C3orf33-204ENST00000486435 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
C3orf33-204ENST00000486435 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
C3orf33-204ENST00000486435 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
C3orf33-204ENST00000486435 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
C3orf33-204ENST00000486435 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
C3orf33-204ENST00000486435 PHF23Q9BUL5 403 aaPredicted RBP23.97■■□□□ 1.43
C3orf33-204ENST00000486435 SMARCA4P51532 1647 aa23.89■■□□□ 1.42
C3orf33-204ENST00000486435 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
C3orf33-204ENST00000486435 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
C3orf33-204ENST00000486435 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
C3orf33-204ENST00000486435 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
C3orf33-204ENST00000486435 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
C3orf33-204ENST00000486435 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
C3orf33-204ENST00000486435 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
C3orf33-204ENST00000486435 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
C3orf33-204ENST00000486435 WIZO95785 1651 aa23.44■■□□□ 1.34
C3orf33-204ENST00000486435 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
C3orf33-204ENST00000486435 NESP48681 1621 aa23.26■■□□□ 1.31
C3orf33-204ENST00000486435 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
C3orf33-204ENST00000486435 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
C3orf33-204ENST00000486435 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
C3orf33-204ENST00000486435 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
C3orf33-204ENST00000486435 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
C3orf33-204ENST00000486435 CUX2O14529 1486 aa23.03■■□□□ 1.28
C3orf33-204ENST00000486435 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
C3orf33-204ENST00000486435 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
C3orf33-204ENST00000486435 CFTRP13569 1480 aa22.94■■□□□ 1.26
C3orf33-204ENST00000486435 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
C3orf33-204ENST00000486435 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
C3orf33-204ENST00000486435 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
C3orf33-204ENST00000486435 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
C3orf33-204ENST00000486435 WDR62O43379 1518 aa22.76■■□□□ 1.23
C3orf33-204ENST00000486435 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
C3orf33-204ENST00000486435 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
C3orf33-204ENST00000486435 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
C3orf33-204ENST00000486435 FOXD1Q16676 465 aa22.59■■□□□ 1.21
C3orf33-204ENST00000486435 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
C3orf33-204ENST00000486435 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
C3orf33-204ENST00000486435 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
C3orf33-204ENST00000486435 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
C3orf33-204ENST00000486435 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
C3orf33-204ENST00000486435 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
C3orf33-204ENST00000486435 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
C3orf33-204ENST00000486435 CUX1P39880 1505 aa22.24■■□□□ 1.15
C3orf33-204ENST00000486435 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
C3orf33-204ENST00000486435 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
C3orf33-204ENST00000486435 EIF4G3O43432 1585 aaKnown RBP22.17■■□□□ 1.14
C3orf33-204ENST00000486435 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
C3orf33-204ENST00000486435 SOGA1O94964 1423 aa22.14■■□□□ 1.14
C3orf33-204ENST00000486435 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.133e-6■■■□□ 15.3
C3orf33-204ENST00000486435 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
C3orf33-204ENST00000486435 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
C3orf33-204ENST00000486435 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
C3orf33-204ENST00000486435 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
C3orf33-204ENST00000486435 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
C3orf33-204ENST00000486435 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
C3orf33-204ENST00000486435 SYNJ1O43426 1573 aa22■■□□□ 1.11
C3orf33-204ENST00000486435 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
C3orf33-204ENST00000486435 GRIN2BQ13224 1484 aa21.91■■□□□ 1.1
C3orf33-204ENST00000486435 CHD1O14646 1710 aa21.91■■□□□ 1.1
C3orf33-204ENST00000486435 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
C3orf33-204ENST00000486435 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
C3orf33-204ENST00000486435 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
C3orf33-204ENST00000486435 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
C3orf33-204ENST00000486435 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
C3orf33-204ENST00000486435 FBLN2P98095 1184 aa21.82■■□□□ 1.08
C3orf33-204ENST00000486435 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
C3orf33-204ENST00000486435 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
C3orf33-204ENST00000486435 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
C3orf33-204ENST00000486435 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
C3orf33-204ENST00000486435 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
C3orf33-204ENST00000486435 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
C3orf33-204ENST00000486435 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
C3orf33-204ENST00000486435 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
C3orf33-204ENST00000486435 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
C3orf33-204ENST00000486435 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
C3orf33-204ENST00000486435 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
C3orf33-204ENST00000486435 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
C3orf33-204ENST00000486435 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
C3orf33-204ENST00000486435 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
C3orf33-204ENST00000486435 NUP160Q12769 1436 aa21.55■■□□□ 1.04
C3orf33-204ENST00000486435 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
C3orf33-204ENST00000486435 ARAP1Q96P48 1450 aa21.52■■□□□ 1.03
C3orf33-204ENST00000486435 IGF1RP08069 1367 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms