RNA–Protein interactions for RNA: ENST00000485113.5

CHD1L-207, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 3

Gene CHD1L, Length 377 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-207ENST00000485113 NISCHQ9Y2I1 1504 aa13.78□□□□□ -0.2
CHD1L-207ENST00000485113 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-207ENST00000485113 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
CHD1L-207ENST00000485113 ABCC9O60706 1549 aa12.24□□□□□ -0.45
CHD1L-207ENST00000485113 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
CHD1L-207ENST00000485113 RB1CC1Q8TDY2 1594 aa11.74□□□□□ -0.53
CHD1L-207ENST00000485113 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
CHD1L-207ENST00000485113 NACADO15069 1562 aa11.67□□□□□ -0.54
CHD1L-207ENST00000485113 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
CHD1L-207ENST00000485113 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
CHD1L-207ENST00000485113 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
CHD1L-207ENST00000485113 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
CHD1L-207ENST00000485113 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.59
CHD1L-207ENST00000485113 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
CHD1L-207ENST00000485113 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHD1L-207ENST00000485113 SCRIBQ14160 1630 aa11.29□□□□□ -0.6
CHD1L-207ENST00000485113 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
CHD1L-207ENST00000485113 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
CHD1L-207ENST00000485113 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
CHD1L-207ENST00000485113 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
CHD1L-207ENST00000485113 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
CHD1L-207ENST00000485113 PHF23Q9BUL5 403 aaPredicted RBP10.81□□□□□ -0.68
CHD1L-207ENST00000485113 SMARCA4P51532 1647 aa10.79□□□□□ -0.68
CHD1L-207ENST00000485113 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
CHD1L-207ENST00000485113 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
CHD1L-207ENST00000485113 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
CHD1L-207ENST00000485113 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
CHD1L-207ENST00000485113 ATAD2BQ9ULI0 1458 aa10.7□□□□□ -0.7
CHD1L-207ENST00000485113 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
CHD1L-207ENST00000485113 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
CHD1L-207ENST00000485113 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
CHD1L-207ENST00000485113 WIZO95785 1651 aa10.57□□□□□ -0.72
CHD1L-207ENST00000485113 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
CHD1L-207ENST00000485113 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
CHD1L-207ENST00000485113 NESP48681 1621 aa10.55□□□□□ -0.72
CHD1L-207ENST00000485113 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
CHD1L-207ENST00000485113 CUX2O14529 1486 aa10.53□□□□□ -0.72
CHD1L-207ENST00000485113 THOC2Q8NI27 1593 aaKnown RBP10.5□□□□□ -0.73
CHD1L-207ENST00000485113 PRDM2Q13029 1718 aa10.46□□□□□ -0.74
CHD1L-207ENST00000485113 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
CHD1L-207ENST00000485113 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
CHD1L-207ENST00000485113 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
CHD1L-207ENST00000485113 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
CHD1L-207ENST00000485113 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
CHD1L-207ENST00000485113 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
CHD1L-207ENST00000485113 FOXD1Q16676 465 aa10.34□□□□□ -0.75
CHD1L-207ENST00000485113 WDR62O43379 1518 aa10.33□□□□□ -0.76
CHD1L-207ENST00000485113 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
CHD1L-207ENST00000485113 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
CHD1L-207ENST00000485113 CFTRP13569 1480 aa10.3□□□□□ -0.76
CHD1L-207ENST00000485113 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
CHD1L-207ENST00000485113 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
CHD1L-207ENST00000485113 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
CHD1L-207ENST00000485113 TOPBP1Q92547 1522 aa10.12□□□□□ -0.79
CHD1L-207ENST00000485113 DNMBPQ6XZF7 1577 aa10.12□□□□□ -0.79
CHD1L-207ENST00000485113 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
CHD1L-207ENST00000485113 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
CHD1L-207ENST00000485113 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
CHD1L-207ENST00000485113 CHD1O14646 1710 aa10.08□□□□□ -0.8
CHD1L-207ENST00000485113 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
CHD1L-207ENST00000485113 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
CHD1L-207ENST00000485113 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
CHD1L-207ENST00000485113 POLA1P09884 1462 aaPredicted RBP10.01□□□□□ -0.81
CHD1L-207ENST00000485113 RIMBP3CA6NJZ7 1639 aa10□□□□□ -0.81
CHD1L-207ENST00000485113 RIMBP3BA6NNM3 1639 aa10□□□□□ -0.81
CHD1L-207ENST00000485113 RIMBP3Q9UFD9 1639 aa10□□□□□ -0.81
CHD1L-207ENST00000485113 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
CHD1L-207ENST00000485113 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
CHD1L-207ENST00000485113 CUX1P39880 1505 aa9.98□□□□□ -0.81
CHD1L-207ENST00000485113 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.822e-8■■■■■ 29
CHD1L-207ENST00000485113 FGD5Q6ZNL6 1462 aa9.96□□□□□ -0.82
CHD1L-207ENST00000485113 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.82
CHD1L-207ENST00000485113 TRIM41Q8WV44 630 aa9.95□□□□□ -0.82
CHD1L-207ENST00000485113 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
CHD1L-207ENST00000485113 SOGA1O94964 1423 aa9.93□□□□□ -0.82
CHD1L-207ENST00000485113 PLPPR3Q6T4P5 718 aa9.93□□□□□ -0.82
CHD1L-207ENST00000485113 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
CHD1L-207ENST00000485113 ARHGEF11O15085 1522 aa9.91□□□□□ -0.82
CHD1L-207ENST00000485113 ABCA5Q8WWZ7 1642 aa9.9□□□□□ -0.82
CHD1L-207ENST00000485113 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
CHD1L-207ENST00000485113 TDRD9Q8NDG6 1382 aaKnown RBP9.88□□□□□ -0.83
CHD1L-207ENST00000485113 TOP2BQ02880 1626 aa9.88□□□□□ -0.83
CHD1L-207ENST00000485113 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
CHD1L-207ENST00000485113 SYNJ1O43426 1573 aa9.86□□□□□ -0.83
CHD1L-207ENST00000485113 GRIN2BQ13224 1484 aa9.85□□□□□ -0.83
CHD1L-207ENST00000485113 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
CHD1L-207ENST00000485113 ABCA10Q8WWZ4 1543 aa9.85□□□□□ -0.83
CHD1L-207ENST00000485113 FBLN2P98095 1184 aa9.84□□□□□ -0.83
CHD1L-207ENST00000485113 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
CHD1L-207ENST00000485113 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
CHD1L-207ENST00000485113 ARAP1Q96P48 1450 aa9.81□□□□□ -0.84
CHD1L-207ENST00000485113 MSH5O43196 834 aa9.81□□□□□ -0.84
CHD1L-207ENST00000485113 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
CHD1L-207ENST00000485113 WRNQ14191 1432 aaPredicted RBP eCLIP9.8□□□□□ -0.84
CHD1L-207ENST00000485113 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
CHD1L-207ENST00000485113 CEP170Q5SW79 1584 aa9.75□□□□□ -0.85
CHD1L-207ENST00000485113 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
CHD1L-207ENST00000485113 CYB5RLQ6IPT4 315 aa9.75□□□□□ -0.85
CHD1L-207ENST00000485113 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
CHD1L-207ENST00000485113 SHROOM2Q13796 1616 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms