RNA–Protein interactions for RNA: ENST00000484601.5

PCMT1-207, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-207ENST00000484601 NISCHQ9Y2I1 1504 aa44.75■■■■■ 4.76
PCMT1-207ENST00000484601 ABCC9O60706 1549 aa41.11■■■■■ 4.17
PCMT1-207ENST00000484601 CCDC180Q9P1Z9 1646 aa40.55■■■■■ 4.08
PCMT1-207ENST00000484601 DNAJC5BQ9UF47 199 aa39.28■■■■□ 3.88
PCMT1-207ENST00000484601 RB1CC1Q8TDY2 1594 aa38.92■■■■□ 3.82
PCMT1-207ENST00000484601 NACADO15069 1562 aa38.52■■■■□ 3.76
PCMT1-207ENST00000484601 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
PCMT1-207ENST00000484601 UNC13AQ9UPW8 1703 aa37.96■■■■□ 3.67
PCMT1-207ENST00000484601 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
PCMT1-207ENST00000484601 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
PCMT1-207ENST00000484601 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
PCMT1-207ENST00000484601 SHROOM4Q9ULL8 1493 aa37.41■■■■□ 3.58
PCMT1-207ENST00000484601 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
PCMT1-207ENST00000484601 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
PCMT1-207ENST00000484601 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
PCMT1-207ENST00000484601 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
PCMT1-207ENST00000484601 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
PCMT1-207ENST00000484601 DNAJC5Q9H3Z4 198 aa36.72■■■■□ 3.47
PCMT1-207ENST00000484601 SCRIBQ14160 1630 aa36.71■■■■□ 3.47
PCMT1-207ENST00000484601 CUX2O14529 1486 aa35.92■■■■□ 3.34
PCMT1-207ENST00000484601 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
PCMT1-207ENST00000484601 ERCC6Q03468 1493 aa35.55■■■■□ 3.28
PCMT1-207ENST00000484601 ATAD2BQ9ULI0 1458 aa35.3■■■■□ 3.24
PCMT1-207ENST00000484601 HMGXB3Q12766 1538 aa35.25■■■■□ 3.23
PCMT1-207ENST00000484601 SMARCA2P51531 1590 aa35.17■■■■□ 3.22
PCMT1-207ENST00000484601 NESP48681 1621 aa35.11■■■■□ 3.21
PCMT1-207ENST00000484601 SMARCA4P51532 1647 aa35.05■■■■□ 3.2
PCMT1-207ENST00000484601 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
PCMT1-207ENST00000484601 LAMC3Q9Y6N6 1575 aa34.87■■■■□ 3.17
PCMT1-207ENST00000484601 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
PCMT1-207ENST00000484601 PEG3Q9GZU2 1588 aa34.85■■■■□ 3.17
PCMT1-207ENST00000484601 BAZ1AQ9NRL2 1556 aaPredicted RBP34.79■■■■□ 3.16
PCMT1-207ENST00000484601 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
PCMT1-207ENST00000484601 KIF21AQ7Z4S6 1674 aa34.64■■■■□ 3.14
PCMT1-207ENST00000484601 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
PCMT1-207ENST00000484601 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
PCMT1-207ENST00000484601 MRC2Q9UBG0 1479 aa34.4■■■■□ 3.1
PCMT1-207ENST00000484601 CADPSQ9ULU8 1353 aa34.4■■■■□ 3.1
PCMT1-207ENST00000484601 WDR62O43379 1518 aa34.4■■■■□ 3.1
PCMT1-207ENST00000484601 CEP164Q9UPV0 1460 aa34.09■■■■□ 3.05
PCMT1-207ENST00000484601 OSCARQ8IYS5 282 aa34.03■■■■□ 3.04
PCMT1-207ENST00000484601 FANCD2Q9BXW9 1451 aa33.97■■■■□ 3.03
PCMT1-207ENST00000484601 WIZO95785 1651 aa33.92■■■■□ 3.02
PCMT1-207ENST00000484601 CFTRP13569 1480 aa33.88■■■■□ 3.01
PCMT1-207ENST00000484601 URB2Q14146 1524 aaKnown RBP33.75■■■□□ 2.99
PCMT1-207ENST00000484601 RIMBP3CA6NJZ7 1639 aa33.69■■■□□ 2.98
PCMT1-207ENST00000484601 RIMBP3BA6NNM3 1639 aa33.69■■■□□ 2.98
PCMT1-207ENST00000484601 RIMBP3Q9UFD9 1639 aa33.69■■■□□ 2.98
PCMT1-207ENST00000484601 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
PCMT1-207ENST00000484601 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
PCMT1-207ENST00000484601 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
PCMT1-207ENST00000484601 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.94
PCMT1-207ENST00000484601 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
PCMT1-207ENST00000484601 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
PCMT1-207ENST00000484601 TOPBP1Q92547 1522 aa33.25■■■□□ 2.91
PCMT1-207ENST00000484601 EIF4G3O43432 1585 aaKnown RBP33.24■■■□□ 2.91
PCMT1-207ENST00000484601 CYB5RLQ6IPT4 315 aa33.2■■■□□ 2.91
PCMT1-207ENST00000484601 ABCC8Q09428 1581 aa33.2■■■□□ 2.91
PCMT1-207ENST00000484601 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
PCMT1-207ENST00000484601 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
PCMT1-207ENST00000484601 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
PCMT1-207ENST00000484601 CHD1O14646 1710 aa33.07■■■□□ 2.88
PCMT1-207ENST00000484601 TARBP1Q13395 1621 aaKnown RBP33.06■■■□□ 2.88
PCMT1-207ENST00000484601 TRHP20396 242 aaPredicted RBP33.02■■■□□ 2.88
PCMT1-207ENST00000484601 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.872e-6■■■■■ 27.8
PCMT1-207ENST00000484601 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
PCMT1-207ENST00000484601 CLASP1Q7Z460 1538 aa32.81■■■□□ 2.84
PCMT1-207ENST00000484601 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PCMT1-207ENST00000484601 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
PCMT1-207ENST00000484601 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
PCMT1-207ENST00000484601 SOGA1O94964 1423 aa32.67■■■□□ 2.82
PCMT1-207ENST00000484601 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
PCMT1-207ENST00000484601 TDRD9Q8NDG6 1382 aaKnown RBP32.66■■■□□ 2.82
PCMT1-207ENST00000484601 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
PCMT1-207ENST00000484601 MAGI1Q96QZ7 1491 aaPredicted RBP32.63■■■□□ 2.81
PCMT1-207ENST00000484601 AEBP2Q6ZN18 517 aaPredicted RBP32.63■■■□□ 2.81
PCMT1-207ENST00000484601 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
PCMT1-207ENST00000484601 SYNJ2O15056 1496 aa32.52■■■□□ 2.8
PCMT1-207ENST00000484601 GRIN2BQ13224 1484 aa32.52■■■□□ 2.8
PCMT1-207ENST00000484601 FGD5Q6ZNL6 1462 aa32.52■■■□□ 2.8
PCMT1-207ENST00000484601 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
PCMT1-207ENST00000484601 CUX1P39880 1505 aa32.39■■■□□ 2.78
PCMT1-207ENST00000484601 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
PCMT1-207ENST00000484601 PBRM1Q86U86 1689 aa32.28■■■□□ 2.76
PCMT1-207ENST00000484601 ABCA5Q8WWZ7 1642 aa32.2■■■□□ 2.75
PCMT1-207ENST00000484601 ABCA10Q8WWZ4 1543 aa32.18■■■□□ 2.74
PCMT1-207ENST00000484601 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
PCMT1-207ENST00000484601 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
PCMT1-207ENST00000484601 NUP160Q12769 1436 aa32.08■■■□□ 2.73
PCMT1-207ENST00000484601 CEP170Q5SW79 1584 aa32.06■■■□□ 2.72
PCMT1-207ENST00000484601 SHROOM2Q13796 1616 aa32.03■■■□□ 2.72
PCMT1-207ENST00000484601 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
PCMT1-207ENST00000484601 KIF13AQ9H1H9 1805 aa31.93■■■□□ 2.7
PCMT1-207ENST00000484601 FHAD1B1AJZ9 1412 aa31.87■■■□□ 2.69
PCMT1-207ENST00000484601 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
PCMT1-207ENST00000484601 ERICH3Q5RHP9 1530 aa31.78■■■□□ 2.68
PCMT1-207ENST00000484601 ABCC10Q5T3U5 1492 aa31.74■■■□□ 2.67
PCMT1-207ENST00000484601 PRG4Q92954 1404 aaPredicted RBP31.72■■■□□ 2.67
PCMT1-207ENST00000484601 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
PCMT1-207ENST00000484601 MAPKBP1O60336 1514 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms