RNA–Protein interactions for RNA: ENST00000483676.1

PLXNB1-215, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-215ENST00000483676 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
PLXNB1-215ENST00000483676 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
PLXNB1-215ENST00000483676 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
PLXNB1-215ENST00000483676 ABCC9O60706 1549 aa14.62□□□□□ -0.07
PLXNB1-215ENST00000483676 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
PLXNB1-215ENST00000483676 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
PLXNB1-215ENST00000483676 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
PLXNB1-215ENST00000483676 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
PLXNB1-215ENST00000483676 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.224e-9■□□□□ 11.2
PLXNB1-215ENST00000483676 RB1CC1Q8TDY2 1594 aa13.55□□□□□ -0.24
PLXNB1-215ENST00000483676 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
PLXNB1-215ENST00000483676 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
PLXNB1-215ENST00000483676 FOXD1Q16676 465 aa13.36□□□□□ -0.27
PLXNB1-215ENST00000483676 NACADO15069 1562 aa13.32□□□□□ -0.28
PLXNB1-215ENST00000483676 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
PLXNB1-215ENST00000483676 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
PLXNB1-215ENST00000483676 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
PLXNB1-215ENST00000483676 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
PLXNB1-215ENST00000483676 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
PLXNB1-215ENST00000483676 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
PLXNB1-215ENST00000483676 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
PLXNB1-215ENST00000483676 SHROOM4Q9ULL8 1493 aa12.82□□□□□ -0.36
PLXNB1-215ENST00000483676 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
PLXNB1-215ENST00000483676 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
PLXNB1-215ENST00000483676 CUX2O14529 1486 aa12.68□□□□□ -0.38
PLXNB1-215ENST00000483676 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
PLXNB1-215ENST00000483676 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
PLXNB1-215ENST00000483676 ADRA2BP18089 450 aa12.62□□□□□ -0.39
PLXNB1-215ENST00000483676 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
PLXNB1-215ENST00000483676 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
PLXNB1-215ENST00000483676 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
PLXNB1-215ENST00000483676 MSH5O43196 834 aa12.46□□□□□ -0.41
PLXNB1-215ENST00000483676 NESP48681 1621 aa12.41□□□□□ -0.42
PLXNB1-215ENST00000483676 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
PLXNB1-215ENST00000483676 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
PLXNB1-215ENST00000483676 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
PLXNB1-215ENST00000483676 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
PLXNB1-215ENST00000483676 SMARCA2P51531 1590 aa12.21□□□□□ -0.46
PLXNB1-215ENST00000483676 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
PLXNB1-215ENST00000483676 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
PLXNB1-215ENST00000483676 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
PLXNB1-215ENST00000483676 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
PLXNB1-215ENST00000483676 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
PLXNB1-215ENST00000483676 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
PLXNB1-215ENST00000483676 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
PLXNB1-215ENST00000483676 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
PLXNB1-215ENST00000483676 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
PLXNB1-215ENST00000483676 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.48
PLXNB1-215ENST00000483676 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.49
PLXNB1-215ENST00000483676 WDR62O43379 1518 aa11.96□□□□□ -0.49
PLXNB1-215ENST00000483676 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
PLXNB1-215ENST00000483676 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
PLXNB1-215ENST00000483676 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
PLXNB1-215ENST00000483676 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
PLXNB1-215ENST00000483676 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
PLXNB1-215ENST00000483676 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
PLXNB1-215ENST00000483676 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
PLXNB1-215ENST00000483676 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
PLXNB1-215ENST00000483676 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
PLXNB1-215ENST00000483676 FBLN2P98095 1184 aa11.79□□□□□ -0.52
PLXNB1-215ENST00000483676 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
PLXNB1-215ENST00000483676 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
PLXNB1-215ENST00000483676 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
PLXNB1-215ENST00000483676 CFTRP13569 1480 aa11.72□□□□□ -0.53
PLXNB1-215ENST00000483676 WIZO95785 1651 aa11.7□□□□□ -0.54
PLXNB1-215ENST00000483676 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
PLXNB1-215ENST00000483676 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■□□□□ 10.6
PLXNB1-215ENST00000483676 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
PLXNB1-215ENST00000483676 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
PLXNB1-215ENST00000483676 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
PLXNB1-215ENST00000483676 CHD1O14646 1710 aa11.57□□□□□ -0.56
PLXNB1-215ENST00000483676 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
PLXNB1-215ENST00000483676 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
PLXNB1-215ENST00000483676 EIF4G3O43432 1585 aaKnown RBP11.55□□□□□ -0.56
PLXNB1-215ENST00000483676 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
PLXNB1-215ENST00000483676 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
PLXNB1-215ENST00000483676 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
PLXNB1-215ENST00000483676 ABCC8Q09428 1581 aa11.46□□□□□ -0.57
PLXNB1-215ENST00000483676 RAD54L2Q9Y4B4 1467 aa11.45□□□□□ -0.58
PLXNB1-215ENST00000483676 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
PLXNB1-215ENST00000483676 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
PLXNB1-215ENST00000483676 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
PLXNB1-215ENST00000483676 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
PLXNB1-215ENST00000483676 SOGA1O94964 1423 aa11.43□□□□□ -0.58
PLXNB1-215ENST00000483676 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
PLXNB1-215ENST00000483676 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
PLXNB1-215ENST00000483676 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
PLXNB1-215ENST00000483676 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
PLXNB1-215ENST00000483676 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
PLXNB1-215ENST00000483676 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
PLXNB1-215ENST00000483676 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
PLXNB1-215ENST00000483676 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
PLXNB1-215ENST00000483676 FAM69CQ0P6D2 419 aa11.34□□□□□ -0.59
PLXNB1-215ENST00000483676 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
PLXNB1-215ENST00000483676 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
PLXNB1-215ENST00000483676 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
PLXNB1-215ENST00000483676 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
PLXNB1-215ENST00000483676 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.6
PLXNB1-215ENST00000483676 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
PLXNB1-215ENST00000483676 KIF13AQ9H1H9 1805 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms