RNA–Protein interactions for RNA: ENST00000483393.5

MRPL38-211, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-211ENST00000483393 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
MRPL38-211ENST00000483393 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.97
MRPL38-211ENST00000483393 ABCC9O60706 1549 aa20.79■□□□□ 0.92
MRPL38-211ENST00000483393 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
MRPL38-211ENST00000483393 NACADO15069 1562 aa19.91■□□□□ 0.78
MRPL38-211ENST00000483393 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
MRPL38-211ENST00000483393 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
MRPL38-211ENST00000483393 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
MRPL38-211ENST00000483393 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
MRPL38-211ENST00000483393 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
MRPL38-211ENST00000483393 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
MRPL38-211ENST00000483393 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.692e-10■■■■■ 39.9
MRPL38-211ENST00000483393 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
MRPL38-211ENST00000483393 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
MRPL38-211ENST00000483393 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
MRPL38-211ENST00000483393 SHROOM4Q9ULL8 1493 aa19.18■□□□□ 0.66
MRPL38-211ENST00000483393 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
MRPL38-211ENST00000483393 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
MRPL38-211ENST00000483393 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
MRPL38-211ENST00000483393 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
MRPL38-211ENST00000483393 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
MRPL38-211ENST00000483393 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
MRPL38-211ENST00000483393 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
MRPL38-211ENST00000483393 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
MRPL38-211ENST00000483393 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
MRPL38-211ENST00000483393 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
MRPL38-211ENST00000483393 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
MRPL38-211ENST00000483393 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
MRPL38-211ENST00000483393 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
MRPL38-211ENST00000483393 WIZO95785 1651 aa18.02■□□□□ 0.47
MRPL38-211ENST00000483393 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
MRPL38-211ENST00000483393 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
MRPL38-211ENST00000483393 NESP48681 1621 aa17.94■□□□□ 0.46
MRPL38-211ENST00000483393 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
MRPL38-211ENST00000483393 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
MRPL38-211ENST00000483393 CUX2O14529 1486 aa17.84■□□□□ 0.45
MRPL38-211ENST00000483393 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
MRPL38-211ENST00000483393 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
MRPL38-211ENST00000483393 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
MRPL38-211ENST00000483393 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
MRPL38-211ENST00000483393 CFTRP13569 1480 aa17.69■□□□□ 0.42
MRPL38-211ENST00000483393 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
MRPL38-211ENST00000483393 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
MRPL38-211ENST00000483393 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
MRPL38-211ENST00000483393 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
MRPL38-211ENST00000483393 WDR62O43379 1518 aa17.57■□□□□ 0.4
MRPL38-211ENST00000483393 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
MRPL38-211ENST00000483393 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
MRPL38-211ENST00000483393 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
MRPL38-211ENST00000483393 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
MRPL38-211ENST00000483393 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
MRPL38-211ENST00000483393 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
MRPL38-211ENST00000483393 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
MRPL38-211ENST00000483393 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
MRPL38-211ENST00000483393 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
MRPL38-211ENST00000483393 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
MRPL38-211ENST00000483393 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
MRPL38-211ENST00000483393 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
MRPL38-211ENST00000483393 CUX1P39880 1505 aa17.11■□□□□ 0.33
MRPL38-211ENST00000483393 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
MRPL38-211ENST00000483393 SOGA1O94964 1423 aa17.09■□□□□ 0.33
MRPL38-211ENST00000483393 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
MRPL38-211ENST00000483393 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
MRPL38-211ENST00000483393 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
MRPL38-211ENST00000483393 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.322e-11■■■■■ 31
MRPL38-211ENST00000483393 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
MRPL38-211ENST00000483393 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
MRPL38-211ENST00000483393 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
MRPL38-211ENST00000483393 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
MRPL38-211ENST00000483393 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
MRPL38-211ENST00000483393 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
MRPL38-211ENST00000483393 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
MRPL38-211ENST00000483393 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
MRPL38-211ENST00000483393 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
MRPL38-211ENST00000483393 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
MRPL38-211ENST00000483393 CHD1O14646 1710 aa16.9■□□□□ 0.3
MRPL38-211ENST00000483393 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
MRPL38-211ENST00000483393 FBLN2P98095 1184 aa16.89■□□□□ 0.29
MRPL38-211ENST00000483393 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
MRPL38-211ENST00000483393 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
MRPL38-211ENST00000483393 CHMP7Q8WUX9 453 aaPredicted RBP16.83■□□□□ 0.28
MRPL38-211ENST00000483393 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
MRPL38-211ENST00000483393 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
MRPL38-211ENST00000483393 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
MRPL38-211ENST00000483393 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
MRPL38-211ENST00000483393 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
MRPL38-211ENST00000483393 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
MRPL38-211ENST00000483393 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
MRPL38-211ENST00000483393 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
MRPL38-211ENST00000483393 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
MRPL38-211ENST00000483393 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
MRPL38-211ENST00000483393 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
MRPL38-211ENST00000483393 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
MRPL38-211ENST00000483393 NUP160Q12769 1436 aa16.62■□□□□ 0.25
MRPL38-211ENST00000483393 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
MRPL38-211ENST00000483393 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
MRPL38-211ENST00000483393 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
MRPL38-211ENST00000483393 IGF1RP08069 1367 aa16.57■□□□□ 0.24
MRPL38-211ENST00000483393 CUL7Q14999 1698 aa16.56■□□□□ 0.24
MRPL38-211ENST00000483393 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms