RNA–Protein interactions for RNA: ENST00000482652.1

XPNPEP3-205, Transcript of X-prolyl aminopeptidase 3, humanhuman

TSL 1 (best)

Gene XPNPEP3, Length 1,418 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3-205ENST00000482652 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
XPNPEP3-205ENST00000482652 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
XPNPEP3-205ENST00000482652 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
XPNPEP3-205ENST00000482652 ABCC9O60706 1549 aa23.88■■□□□ 1.41
XPNPEP3-205ENST00000482652 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
XPNPEP3-205ENST00000482652 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
XPNPEP3-205ENST00000482652 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
XPNPEP3-205ENST00000482652 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
XPNPEP3-205ENST00000482652 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
XPNPEP3-205ENST00000482652 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
XPNPEP3-205ENST00000482652 NACADO15069 1562 aa22.01■■□□□ 1.11
XPNPEP3-205ENST00000482652 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
XPNPEP3-205ENST00000482652 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
XPNPEP3-205ENST00000482652 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
XPNPEP3-205ENST00000482652 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
XPNPEP3-205ENST00000482652 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.04
XPNPEP3-205ENST00000482652 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
XPNPEP3-205ENST00000482652 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
XPNPEP3-205ENST00000482652 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
XPNPEP3-205ENST00000482652 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
XPNPEP3-205ENST00000482652 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
XPNPEP3-205ENST00000482652 FOXD1Q16676 465 aa20.9■□□□□ 0.94
XPNPEP3-205ENST00000482652 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
XPNPEP3-205ENST00000482652 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
XPNPEP3-205ENST00000482652 CUX2O14529 1486 aa20.85■□□□□ 0.93
XPNPEP3-205ENST00000482652 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
XPNPEP3-205ENST00000482652 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.88
XPNPEP3-205ENST00000482652 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
XPNPEP3-205ENST00000482652 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
XPNPEP3-205ENST00000482652 NESP48681 1621 aa20.3■□□□□ 0.84
XPNPEP3-205ENST00000482652 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
XPNPEP3-205ENST00000482652 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
XPNPEP3-205ENST00000482652 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
XPNPEP3-205ENST00000482652 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
XPNPEP3-205ENST00000482652 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
XPNPEP3-205ENST00000482652 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
XPNPEP3-205ENST00000482652 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
XPNPEP3-205ENST00000482652 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
XPNPEP3-205ENST00000482652 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
XPNPEP3-205ENST00000482652 ADRA2BP18089 450 aa19.85■□□□□ 0.77
XPNPEP3-205ENST00000482652 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
XPNPEP3-205ENST00000482652 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
XPNPEP3-205ENST00000482652 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
XPNPEP3-205ENST00000482652 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
XPNPEP3-205ENST00000482652 WDR62O43379 1518 aa19.75■□□□□ 0.75
XPNPEP3-205ENST00000482652 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
XPNPEP3-205ENST00000482652 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
XPNPEP3-205ENST00000482652 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
XPNPEP3-205ENST00000482652 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
XPNPEP3-205ENST00000482652 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
XPNPEP3-205ENST00000482652 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
XPNPEP3-205ENST00000482652 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.72
XPNPEP3-205ENST00000482652 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
XPNPEP3-205ENST00000482652 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
XPNPEP3-205ENST00000482652 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
XPNPEP3-205ENST00000482652 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
XPNPEP3-205ENST00000482652 MSH5O43196 834 aa19.43■□□□□ 0.7
XPNPEP3-205ENST00000482652 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
XPNPEP3-205ENST00000482652 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
XPNPEP3-205ENST00000482652 CFTRP13569 1480 aa19.31■□□□□ 0.68
XPNPEP3-205ENST00000482652 WIZO95785 1651 aa19.29■□□□□ 0.68
XPNPEP3-205ENST00000482652 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
XPNPEP3-205ENST00000482652 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
XPNPEP3-205ENST00000482652 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
XPNPEP3-205ENST00000482652 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
XPNPEP3-205ENST00000482652 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
XPNPEP3-205ENST00000482652 FBLN2P98095 1184 aa19.08■□□□□ 0.64
XPNPEP3-205ENST00000482652 CHD1O14646 1710 aa19.07■□□□□ 0.64
XPNPEP3-205ENST00000482652 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
XPNPEP3-205ENST00000482652 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
XPNPEP3-205ENST00000482652 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
XPNPEP3-205ENST00000482652 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
XPNPEP3-205ENST00000482652 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
XPNPEP3-205ENST00000482652 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
XPNPEP3-205ENST00000482652 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
XPNPEP3-205ENST00000482652 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
XPNPEP3-205ENST00000482652 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
XPNPEP3-205ENST00000482652 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
XPNPEP3-205ENST00000482652 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
XPNPEP3-205ENST00000482652 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
XPNPEP3-205ENST00000482652 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
XPNPEP3-205ENST00000482652 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
XPNPEP3-205ENST00000482652 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
XPNPEP3-205ENST00000482652 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
XPNPEP3-205ENST00000482652 SOGA1O94964 1423 aa18.71■□□□□ 0.59
XPNPEP3-205ENST00000482652 ILDR1Q86SU0 546 aaPredicted RBP18.7■□□□□ 0.58
XPNPEP3-205ENST00000482652 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
XPNPEP3-205ENST00000482652 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
XPNPEP3-205ENST00000482652 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
XPNPEP3-205ENST00000482652 GRIN2BQ13224 1484 aa18.62■□□□□ 0.57
XPNPEP3-205ENST00000482652 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
XPNPEP3-205ENST00000482652 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
XPNPEP3-205ENST00000482652 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
XPNPEP3-205ENST00000482652 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
XPNPEP3-205ENST00000482652 KIF13AQ9H1H9 1805 aa18.47■□□□□ 0.55
XPNPEP3-205ENST00000482652 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
XPNPEP3-205ENST00000482652 CUX1P39880 1505 aa18.43■□□□□ 0.54
XPNPEP3-205ENST00000482652 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
XPNPEP3-205ENST00000482652 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
XPNPEP3-205ENST00000482652 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms