RNA–Protein interactions for RNA: ENST00000482125.1

FXR1-216, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-216ENST00000482125 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
FXR1-216ENST00000482125 ABCC9O60706 1549 aa22.87■■□□□ 1.25
FXR1-216ENST00000482125 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
FXR1-216ENST00000482125 DNAJC5Q9H3Z4 198 aa21.96■■□□□ 1.11
FXR1-216ENST00000482125 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
FXR1-216ENST00000482125 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
FXR1-216ENST00000482125 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
FXR1-216ENST00000482125 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
FXR1-216ENST00000482125 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
FXR1-216ENST00000482125 NACADO15069 1562 aa20.65■□□□□ 0.9
FXR1-216ENST00000482125 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
FXR1-216ENST00000482125 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
FXR1-216ENST00000482125 CUX2O14529 1486 aa20.33■□□□□ 0.85
FXR1-216ENST00000482125 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
FXR1-216ENST00000482125 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
FXR1-216ENST00000482125 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
FXR1-216ENST00000482125 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
FXR1-216ENST00000482125 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
FXR1-216ENST00000482125 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
FXR1-216ENST00000482125 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
FXR1-216ENST00000482125 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
FXR1-216ENST00000482125 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
FXR1-216ENST00000482125 NESP48681 1621 aa19.25■□□□□ 0.67
FXR1-216ENST00000482125 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
FXR1-216ENST00000482125 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
FXR1-216ENST00000482125 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
FXR1-216ENST00000482125 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
FXR1-216ENST00000482125 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
FXR1-216ENST00000482125 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
FXR1-216ENST00000482125 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
FXR1-216ENST00000482125 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
FXR1-216ENST00000482125 ILDR1Q86SU0 546 aaPredicted RBP19.01■□□□□ 0.63
FXR1-216ENST00000482125 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
FXR1-216ENST00000482125 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
FXR1-216ENST00000482125 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
FXR1-216ENST00000482125 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
FXR1-216ENST00000482125 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
FXR1-216ENST00000482125 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
FXR1-216ENST00000482125 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
FXR1-216ENST00000482125 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
FXR1-216ENST00000482125 WDR62O43379 1518 aa18.78■□□□□ 0.6
FXR1-216ENST00000482125 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
FXR1-216ENST00000482125 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
FXR1-216ENST00000482125 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
FXR1-216ENST00000482125 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
FXR1-216ENST00000482125 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
FXR1-216ENST00000482125 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
FXR1-216ENST00000482125 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
FXR1-216ENST00000482125 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
FXR1-216ENST00000482125 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
FXR1-216ENST00000482125 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
FXR1-216ENST00000482125 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
FXR1-216ENST00000482125 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
FXR1-216ENST00000482125 CHD1O14646 1710 aa18.13■□□□□ 0.49
FXR1-216ENST00000482125 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
FXR1-216ENST00000482125 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
FXR1-216ENST00000482125 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
FXR1-216ENST00000482125 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
FXR1-216ENST00000482125 FBXO41Q8TF61 875 aa17.97■□□□□ 0.47
FXR1-216ENST00000482125 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
FXR1-216ENST00000482125 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
FXR1-216ENST00000482125 CFTRP13569 1480 aa17.94■□□□□ 0.46
FXR1-216ENST00000482125 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
FXR1-216ENST00000482125 FBLN2P98095 1184 aa17.89■□□□□ 0.45
FXR1-216ENST00000482125 SOCS7O14512 581 aa17.88■□□□□ 0.45
FXR1-216ENST00000482125 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
FXR1-216ENST00000482125 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
FXR1-216ENST00000482125 KIF13AQ9H1H9 1805 aa17.82■□□□□ 0.44
FXR1-216ENST00000482125 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.442e-8■□□□□ 8.5
FXR1-216ENST00000482125 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
FXR1-216ENST00000482125 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
FXR1-216ENST00000482125 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
FXR1-216ENST00000482125 TARBP1Q13395 1621 aaKnown RBP17.7■□□□□ 0.42
FXR1-216ENST00000482125 KDM6BO15054 1643 aa17.63■□□□□ 0.41
FXR1-216ENST00000482125 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
FXR1-216ENST00000482125 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
FXR1-216ENST00000482125 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
FXR1-216ENST00000482125 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
FXR1-216ENST00000482125 WIZO95785 1651 aa17.58■□□□□ 0.41
FXR1-216ENST00000482125 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
FXR1-216ENST00000482125 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
FXR1-216ENST00000482125 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
FXR1-216ENST00000482125 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
FXR1-216ENST00000482125 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.39
FXR1-216ENST00000482125 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
FXR1-216ENST00000482125 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
FXR1-216ENST00000482125 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
FXR1-216ENST00000482125 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
FXR1-216ENST00000482125 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
FXR1-216ENST00000482125 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
FXR1-216ENST00000482125 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
FXR1-216ENST00000482125 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
FXR1-216ENST00000482125 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
FXR1-216ENST00000482125 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
FXR1-216ENST00000482125 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
FXR1-216ENST00000482125 SOGA1O94964 1423 aa17.3■□□□□ 0.36
FXR1-216ENST00000482125 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
FXR1-216ENST00000482125 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
FXR1-216ENST00000482125 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
FXR1-216ENST00000482125 NUP160Q12769 1436 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms