RNA–Protein interactions for RNA: ENST00000482054.1

CTSL-205, Transcript of cathepsin L, humanhuman

TSL 2

Gene CTSL, Length 908 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-205ENST00000482054 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
CTSL-205ENST00000482054 ABCC9O60706 1549 aa30.17■■■□□ 2.42
CTSL-205ENST00000482054 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
CTSL-205ENST00000482054 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
CTSL-205ENST00000482054 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
CTSL-205ENST00000482054 NACADO15069 1562 aa28.03■■■□□ 2.08
CTSL-205ENST00000482054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
CTSL-205ENST00000482054 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
CTSL-205ENST00000482054 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
CTSL-205ENST00000482054 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
CTSL-205ENST00000482054 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
CTSL-205ENST00000482054 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
CTSL-205ENST00000482054 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
CTSL-205ENST00000482054 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
CTSL-205ENST00000482054 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
CTSL-205ENST00000482054 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
CTSL-205ENST00000482054 ZCCHC6Q5VYS8 1495 aaKnown RBP26.97■■□□□ 1.91
CTSL-205ENST00000482054 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
CTSL-205ENST00000482054 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
CTSL-205ENST00000482054 CUX2O14529 1486 aa26.27■■□□□ 1.8
CTSL-205ENST00000482054 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
CTSL-205ENST00000482054 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
CTSL-205ENST00000482054 NESP48681 1621 aa25.74■■□□□ 1.71
CTSL-205ENST00000482054 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
CTSL-205ENST00000482054 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
CTSL-205ENST00000482054 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
CTSL-205ENST00000482054 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
CTSL-205ENST00000482054 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CTSL-205ENST00000482054 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
CTSL-205ENST00000482054 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
CTSL-205ENST00000482054 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
CTSL-205ENST00000482054 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
CTSL-205ENST00000482054 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
CTSL-205ENST00000482054 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
CTSL-205ENST00000482054 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
CTSL-205ENST00000482054 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
CTSL-205ENST00000482054 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
CTSL-205ENST00000482054 CADPSQ9ULU8 1353 aa25.08■■□□□ 1.61
CTSL-205ENST00000482054 WDR62O43379 1518 aa25.08■■□□□ 1.61
CTSL-205ENST00000482054 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
CTSL-205ENST00000482054 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
CTSL-205ENST00000482054 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
CTSL-205ENST00000482054 WIZO95785 1651 aa24.77■■□□□ 1.56
CTSL-205ENST00000482054 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
CTSL-205ENST00000482054 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
CTSL-205ENST00000482054 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
CTSL-205ENST00000482054 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
CTSL-205ENST00000482054 CFTRP13569 1480 aa24.65■■□□□ 1.54
CTSL-205ENST00000482054 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
CTSL-205ENST00000482054 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
CTSL-205ENST00000482054 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
CTSL-205ENST00000482054 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
CTSL-205ENST00000482054 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
CTSL-205ENST00000482054 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
CTSL-205ENST00000482054 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
CTSL-205ENST00000482054 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
CTSL-205ENST00000482054 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
CTSL-205ENST00000482054 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
CTSL-205ENST00000482054 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
CTSL-205ENST00000482054 CHD1O14646 1710 aa24.21■■□□□ 1.47
CTSL-205ENST00000482054 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
CTSL-205ENST00000482054 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.467e-6■□□□□ 9.9
CTSL-205ENST00000482054 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
CTSL-205ENST00000482054 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
CTSL-205ENST00000482054 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
CTSL-205ENST00000482054 FBLN2P98095 1184 aa24.09■■□□□ 1.45
CTSL-205ENST00000482054 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
CTSL-205ENST00000482054 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
CTSL-205ENST00000482054 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
CTSL-205ENST00000482054 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
CTSL-205ENST00000482054 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
CTSL-205ENST00000482054 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
CTSL-205ENST00000482054 SOGA1O94964 1423 aa23.84■■□□□ 1.41
CTSL-205ENST00000482054 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
CTSL-205ENST00000482054 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
CTSL-205ENST00000482054 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
CTSL-205ENST00000482054 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
CTSL-205ENST00000482054 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
CTSL-205ENST00000482054 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
CTSL-205ENST00000482054 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
CTSL-205ENST00000482054 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
CTSL-205ENST00000482054 CUX1P39880 1505 aa23.59■■□□□ 1.37
CTSL-205ENST00000482054 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
CTSL-205ENST00000482054 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
CTSL-205ENST00000482054 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
CTSL-205ENST00000482054 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
CTSL-205ENST00000482054 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
CTSL-205ENST00000482054 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
CTSL-205ENST00000482054 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
CTSL-205ENST00000482054 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
CTSL-205ENST00000482054 NUP160Q12769 1436 aa23.37■■□□□ 1.33
CTSL-205ENST00000482054 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
CTSL-205ENST00000482054 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
CTSL-205ENST00000482054 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
CTSL-205ENST00000482054 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
CTSL-205ENST00000482054 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
CTSL-205ENST00000482054 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
CTSL-205ENST00000482054 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
CTSL-205ENST00000482054 ABCC10Q5T3U5 1492 aa23.19■■□□□ 1.3
CTSL-205ENST00000482054 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms