RNA–Protein interactions for RNA: ENST00000481321.1

CRIM1-207, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 346 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-207ENST00000481321 NISCHQ9Y2I1 1504 aa17.2■□□□□ 0.34
CRIM1-207ENST00000481321 ABCC9O60706 1549 aa15.97■□□□□ 0.15
CRIM1-207ENST00000481321 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
CRIM1-207ENST00000481321 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
CRIM1-207ENST00000481321 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
CRIM1-207ENST00000481321 NACADO15069 1562 aa14.84□□□□□ -0.03
CRIM1-207ENST00000481321 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.04
CRIM1-207ENST00000481321 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
CRIM1-207ENST00000481321 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
CRIM1-207ENST00000481321 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
CRIM1-207ENST00000481321 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
CRIM1-207ENST00000481321 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
CRIM1-207ENST00000481321 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.1
CRIM1-207ENST00000481321 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
CRIM1-207ENST00000481321 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
CRIM1-207ENST00000481321 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
CRIM1-207ENST00000481321 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
CRIM1-207ENST00000481321 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
CRIM1-207ENST00000481321 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
CRIM1-207ENST00000481321 CUX2O14529 1486 aa14.08□□□□□ -0.16
CRIM1-207ENST00000481321 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
CRIM1-207ENST00000481321 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
CRIM1-207ENST00000481321 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
CRIM1-207ENST00000481321 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
CRIM1-207ENST00000481321 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
CRIM1-207ENST00000481321 NESP48681 1621 aa13.54□□□□□ -0.24
CRIM1-207ENST00000481321 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
CRIM1-207ENST00000481321 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
CRIM1-207ENST00000481321 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
CRIM1-207ENST00000481321 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CRIM1-207ENST00000481321 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
CRIM1-207ENST00000481321 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
CRIM1-207ENST00000481321 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
CRIM1-207ENST00000481321 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
CRIM1-207ENST00000481321 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
CRIM1-207ENST00000481321 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
CRIM1-207ENST00000481321 WDR62O43379 1518 aa13.31□□□□□ -0.28
CRIM1-207ENST00000481321 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
CRIM1-207ENST00000481321 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
CRIM1-207ENST00000481321 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
CRIM1-207ENST00000481321 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
CRIM1-207ENST00000481321 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
CRIM1-207ENST00000481321 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CRIM1-207ENST00000481321 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
CRIM1-207ENST00000481321 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
CRIM1-207ENST00000481321 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
CRIM1-207ENST00000481321 ARHGEF11O15085 1522 aa13.1□□□□□ -0.31
CRIM1-207ENST00000481321 WIZO95785 1651 aa13.08□□□□□ -0.31
CRIM1-207ENST00000481321 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
CRIM1-207ENST00000481321 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CRIM1-207ENST00000481321 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
CRIM1-207ENST00000481321 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
CRIM1-207ENST00000481321 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
CRIM1-207ENST00000481321 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
CRIM1-207ENST00000481321 CHD1O14646 1710 aa12.93□□□□□ -0.34
CRIM1-207ENST00000481321 CFTRP13569 1480 aa12.92□□□□□ -0.34
CRIM1-207ENST00000481321 CYB5RLQ6IPT4 315 aa12.92□□□□□ -0.34
CRIM1-207ENST00000481321 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
CRIM1-207ENST00000481321 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
CRIM1-207ENST00000481321 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
CRIM1-207ENST00000481321 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
CRIM1-207ENST00000481321 ZNF608Q9ULD9 1512 aaPredicted RBP12.86□□□□□ -0.35
CRIM1-207ENST00000481321 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
CRIM1-207ENST00000481321 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
CRIM1-207ENST00000481321 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
CRIM1-207ENST00000481321 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
CRIM1-207ENST00000481321 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
CRIM1-207ENST00000481321 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
CRIM1-207ENST00000481321 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
CRIM1-207ENST00000481321 FBLN2P98095 1184 aa12.66□□□□□ -0.38
CRIM1-207ENST00000481321 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
CRIM1-207ENST00000481321 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
CRIM1-207ENST00000481321 POLA1P09884 1462 aaPredicted RBP12.58□□□□□ -0.4
CRIM1-207ENST00000481321 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
CRIM1-207ENST00000481321 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
CRIM1-207ENST00000481321 GAPVD1Q14C86 1478 aa12.56□□□□□ -0.4
CRIM1-207ENST00000481321 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
CRIM1-207ENST00000481321 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
CRIM1-207ENST00000481321 PBRM1Q86U86 1689 aa12.52□□□□□ -0.4
CRIM1-207ENST00000481321 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
CRIM1-207ENST00000481321 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
CRIM1-207ENST00000481321 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
CRIM1-207ENST00000481321 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
CRIM1-207ENST00000481321 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
CRIM1-207ENST00000481321 SOGA1O94964 1423 aa12.47□□□□□ -0.41
CRIM1-207ENST00000481321 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
CRIM1-207ENST00000481321 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
CRIM1-207ENST00000481321 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
CRIM1-207ENST00000481321 EEA1Q15075 1411 aa12.4□□□□□ -0.42
CRIM1-207ENST00000481321 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
CRIM1-207ENST00000481321 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
CRIM1-207ENST00000481321 CUX1P39880 1505 aa12.37□□□□□ -0.43
CRIM1-207ENST00000481321 KDM6BO15054 1643 aa12.37□□□□□ -0.43
CRIM1-207ENST00000481321 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
CRIM1-207ENST00000481321 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
CRIM1-207ENST00000481321 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
CRIM1-207ENST00000481321 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
CRIM1-207ENST00000481321 DIP2BQ9P265 1576 aa12.31□□□□□ -0.44
CRIM1-207ENST00000481321 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
CRIM1-207ENST00000481321 ABCC10Q5T3U5 1492 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms