RNA–Protein interactions for RNA: ENST00000481161.5

GCA-209, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-209ENST00000481161 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
GCA-209ENST00000481161 ABCC9O60706 1549 aa21.94■■□□□ 1.1
GCA-209ENST00000481161 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
GCA-209ENST00000481161 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
GCA-209ENST00000481161 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
GCA-209ENST00000481161 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
GCA-209ENST00000481161 NACADO15069 1562 aa20.44■□□□□ 0.86
GCA-209ENST00000481161 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
GCA-209ENST00000481161 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
GCA-209ENST00000481161 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
GCA-209ENST00000481161 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
GCA-209ENST00000481161 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
GCA-209ENST00000481161 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
GCA-209ENST00000481161 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
GCA-209ENST00000481161 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
GCA-209ENST00000481161 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
GCA-209ENST00000481161 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
GCA-209ENST00000481161 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
GCA-209ENST00000481161 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
GCA-209ENST00000481161 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
GCA-209ENST00000481161 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
GCA-209ENST00000481161 CUX2O14529 1486 aa19.11■□□□□ 0.65
GCA-209ENST00000481161 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
GCA-209ENST00000481161 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
GCA-209ENST00000481161 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
GCA-209ENST00000481161 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
GCA-209ENST00000481161 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
GCA-209ENST00000481161 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
GCA-209ENST00000481161 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
GCA-209ENST00000481161 NESP48681 1621 aa18.7■□□□□ 0.58
GCA-209ENST00000481161 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
GCA-209ENST00000481161 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
GCA-209ENST00000481161 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
GCA-209ENST00000481161 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
GCA-209ENST00000481161 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
GCA-209ENST00000481161 WIZO95785 1651 aa18.58■□□□□ 0.57
GCA-209ENST00000481161 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
GCA-209ENST00000481161 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
GCA-209ENST00000481161 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
GCA-209ENST00000481161 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
GCA-209ENST00000481161 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
GCA-209ENST00000481161 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
GCA-209ENST00000481161 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
GCA-209ENST00000481161 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
GCA-209ENST00000481161 WDR62O43379 1518 aa18.25■□□□□ 0.51
GCA-209ENST00000481161 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
GCA-209ENST00000481161 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
GCA-209ENST00000481161 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
GCA-209ENST00000481161 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
GCA-209ENST00000481161 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
GCA-209ENST00000481161 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
GCA-209ENST00000481161 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
GCA-209ENST00000481161 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
GCA-209ENST00000481161 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
GCA-209ENST00000481161 CFTRP13569 1480 aa17.96■□□□□ 0.47
GCA-209ENST00000481161 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
GCA-209ENST00000481161 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
GCA-209ENST00000481161 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
GCA-209ENST00000481161 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
GCA-209ENST00000481161 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
GCA-209ENST00000481161 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
GCA-209ENST00000481161 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
GCA-209ENST00000481161 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
GCA-209ENST00000481161 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
GCA-209ENST00000481161 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
GCA-209ENST00000481161 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
GCA-209ENST00000481161 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
GCA-209ENST00000481161 CHD1O14646 1710 aa17.63■□□□□ 0.41
GCA-209ENST00000481161 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
GCA-209ENST00000481161 FBLN2P98095 1184 aa17.61■□□□□ 0.41
GCA-209ENST00000481161 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
GCA-209ENST00000481161 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
GCA-209ENST00000481161 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.41
GCA-209ENST00000481161 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
GCA-209ENST00000481161 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
GCA-209ENST00000481161 CUX1P39880 1505 aa17.52■□□□□ 0.4
GCA-209ENST00000481161 EEA1Q15075 1411 aa17.52■□□□□ 0.4
GCA-209ENST00000481161 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
GCA-209ENST00000481161 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
GCA-209ENST00000481161 SOGA1O94964 1423 aa17.43■□□□□ 0.38
GCA-209ENST00000481161 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
GCA-209ENST00000481161 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
GCA-209ENST00000481161 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
GCA-209ENST00000481161 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
GCA-209ENST00000481161 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
GCA-209ENST00000481161 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
GCA-209ENST00000481161 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
GCA-209ENST00000481161 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
GCA-209ENST00000481161 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
GCA-209ENST00000481161 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
GCA-209ENST00000481161 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
GCA-209ENST00000481161 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
GCA-209ENST00000481161 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
GCA-209ENST00000481161 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
GCA-209ENST00000481161 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
GCA-209ENST00000481161 KIF21BO75037 1637 aa17.25■□□□□ 0.35
GCA-209ENST00000481161 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
GCA-209ENST00000481161 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
GCA-209ENST00000481161 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
GCA-209ENST00000481161 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms