RNA–Protein interactions for RNA: ENST00000481066.1

PNPT1-206, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 1,281 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-206ENST00000481066 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
PNPT1-206ENST00000481066 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
PNPT1-206ENST00000481066 ABCC9O60706 1549 aa32.17■■■□□ 2.74
PNPT1-206ENST00000481066 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
PNPT1-206ENST00000481066 NACADO15069 1562 aa30.8■■■□□ 2.52
PNPT1-206ENST00000481066 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
PNPT1-206ENST00000481066 MYO15BQ96JP2 1530 aa30.56■■■□□ 2.48
PNPT1-206ENST00000481066 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
PNPT1-206ENST00000481066 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
PNPT1-206ENST00000481066 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
PNPT1-206ENST00000481066 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
PNPT1-206ENST00000481066 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
PNPT1-206ENST00000481066 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
PNPT1-206ENST00000481066 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
PNPT1-206ENST00000481066 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
PNPT1-206ENST00000481066 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
PNPT1-206ENST00000481066 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
PNPT1-206ENST00000481066 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
PNPT1-206ENST00000481066 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
PNPT1-206ENST00000481066 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
PNPT1-206ENST00000481066 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
PNPT1-206ENST00000481066 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
PNPT1-206ENST00000481066 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
PNPT1-206ENST00000481066 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
PNPT1-206ENST00000481066 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
PNPT1-206ENST00000481066 PEG3Q9GZU2 1588 aa28.19■■■□□ 2.1
PNPT1-206ENST00000481066 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
PNPT1-206ENST00000481066 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
PNPT1-206ENST00000481066 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
PNPT1-206ENST00000481066 WIZO95785 1651 aa27.78■■■□□ 2.04
PNPT1-206ENST00000481066 NESP48681 1621 aa27.73■■■□□ 2.03
PNPT1-206ENST00000481066 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
PNPT1-206ENST00000481066 CUX2O14529 1486 aa27.69■■■□□ 2.02
PNPT1-206ENST00000481066 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
PNPT1-206ENST00000481066 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
PNPT1-206ENST00000481066 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
PNPT1-206ENST00000481066 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
PNPT1-206ENST00000481066 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
PNPT1-206ENST00000481066 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
PNPT1-206ENST00000481066 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
PNPT1-206ENST00000481066 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
PNPT1-206ENST00000481066 CFTRP13569 1480 aa27.32■■□□□ 1.96
PNPT1-206ENST00000481066 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
PNPT1-206ENST00000481066 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
PNPT1-206ENST00000481066 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
PNPT1-206ENST00000481066 WDR62O43379 1518 aa27.18■■□□□ 1.94
PNPT1-206ENST00000481066 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
PNPT1-206ENST00000481066 PRDM2Q13029 1718 aa27.12■■□□□ 1.93
PNPT1-206ENST00000481066 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
PNPT1-206ENST00000481066 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
PNPT1-206ENST00000481066 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
PNPT1-206ENST00000481066 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
PNPT1-206ENST00000481066 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
PNPT1-206ENST00000481066 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
PNPT1-206ENST00000481066 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
PNPT1-206ENST00000481066 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
PNPT1-206ENST00000481066 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
PNPT1-206ENST00000481066 OSCARQ8IYS5 282 aa26.45■■□□□ 1.82
PNPT1-206ENST00000481066 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
PNPT1-206ENST00000481066 CUX1P39880 1505 aa26.39■■□□□ 1.81
PNPT1-206ENST00000481066 SOGA1O94964 1423 aa26.39■■□□□ 1.81
PNPT1-206ENST00000481066 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
PNPT1-206ENST00000481066 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
PNPT1-206ENST00000481066 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.813e-10■■■■□ 22.4
PNPT1-206ENST00000481066 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
PNPT1-206ENST00000481066 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
PNPT1-206ENST00000481066 CHD1O14646 1710 aa26.16■■□□□ 1.78
PNPT1-206ENST00000481066 GRIN2BQ13224 1484 aa26.14■■□□□ 1.78
PNPT1-206ENST00000481066 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.77
PNPT1-206ENST00000481066 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
PNPT1-206ENST00000481066 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
PNPT1-206ENST00000481066 MAGI1Q96QZ7 1491 aaPredicted RBP26.12■■□□□ 1.77
PNPT1-206ENST00000481066 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
PNPT1-206ENST00000481066 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
PNPT1-206ENST00000481066 FBLN2P98095 1184 aa26.08■■□□□ 1.77
PNPT1-206ENST00000481066 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
PNPT1-206ENST00000481066 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
PNPT1-206ENST00000481066 ABCA5Q8WWZ7 1642 aa26.05■■□□□ 1.76
PNPT1-206ENST00000481066 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
PNPT1-206ENST00000481066 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
PNPT1-206ENST00000481066 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
PNPT1-206ENST00000481066 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
PNPT1-206ENST00000481066 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
PNPT1-206ENST00000481066 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
PNPT1-206ENST00000481066 ARHGEF11O15085 1522 aa26■■□□□ 1.75
PNPT1-206ENST00000481066 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
PNPT1-206ENST00000481066 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
PNPT1-206ENST00000481066 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
PNPT1-206ENST00000481066 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
PNPT1-206ENST00000481066 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
PNPT1-206ENST00000481066 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
PNPT1-206ENST00000481066 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
PNPT1-206ENST00000481066 CYB5RLQ6IPT4 315 aa25.74■■□□□ 1.71
PNPT1-206ENST00000481066 NUP160Q12769 1436 aa25.69■■□□□ 1.7
PNPT1-206ENST00000481066 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
PNPT1-206ENST00000481066 KIF27Q86VH2 1401 aa25.64■■□□□ 1.7
PNPT1-206ENST00000481066 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
PNPT1-206ENST00000481066 CUL7Q14999 1698 aa25.55■■□□□ 1.68
PNPT1-206ENST00000481066 IGF1RP08069 1367 aa25.54■■□□□ 1.68
PNPT1-206ENST00000481066 RUSC2Q8N2Y8 1516 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms