RNA–Protein interactions for RNA: ENST00000480768.1

GTF2A2-207, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 2

Gene GTF2A2, Length 1,278 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-207ENST00000480768 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
GTF2A2-207ENST00000480768 AEBP2Q6ZN18 517 aaPredicted RBP34.5■■■■□ 3.11
GTF2A2-207ENST00000480768 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
GTF2A2-207ENST00000480768 ABCC9O60706 1549 aa33.57■■■□□ 2.96
GTF2A2-207ENST00000480768 CHIC1Q5VXU3 224 aa32.37■■■□□ 2.77
GTF2A2-207ENST00000480768 RB1CC1Q8TDY2 1594 aa32.17■■■□□ 2.74
GTF2A2-207ENST00000480768 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
GTF2A2-207ENST00000480768 NACADO15069 1562 aa32.07■■■□□ 2.72
GTF2A2-207ENST00000480768 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
GTF2A2-207ENST00000480768 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
GTF2A2-207ENST00000480768 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
GTF2A2-207ENST00000480768 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
GTF2A2-207ENST00000480768 PABPN1Q86U42 306 aaKnown RBP eCLIP31.36■■■□□ 2.61
GTF2A2-207ENST00000480768 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
GTF2A2-207ENST00000480768 SCRIBQ14160 1630 aa31.19■■■□□ 2.58
GTF2A2-207ENST00000480768 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
GTF2A2-207ENST00000480768 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
GTF2A2-207ENST00000480768 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
GTF2A2-207ENST00000480768 CC2D2AQ9P2K1 1620 aa30.35■■■□□ 2.45
GTF2A2-207ENST00000480768 CECR2Q9BXF3 1484 aa30.13■■■□□ 2.41
GTF2A2-207ENST00000480768 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
GTF2A2-207ENST00000480768 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
GTF2A2-207ENST00000480768 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
GTF2A2-207ENST00000480768 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
GTF2A2-207ENST00000480768 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
GTF2A2-207ENST00000480768 SMARCA2P51531 1590 aa29.55■■■□□ 2.32
GTF2A2-207ENST00000480768 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
GTF2A2-207ENST00000480768 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
GTF2A2-207ENST00000480768 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
GTF2A2-207ENST00000480768 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
GTF2A2-207ENST00000480768 WIZO95785 1651 aa29.27■■■□□ 2.28
GTF2A2-207ENST00000480768 PHF23Q9BUL5 403 aaPredicted RBP29.14■■■□□ 2.26
GTF2A2-207ENST00000480768 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
GTF2A2-207ENST00000480768 NESP48681 1621 aa29.02■■■□□ 2.24
GTF2A2-207ENST00000480768 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
GTF2A2-207ENST00000480768 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
GTF2A2-207ENST00000480768 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
GTF2A2-207ENST00000480768 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
GTF2A2-207ENST00000480768 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
GTF2A2-207ENST00000480768 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
GTF2A2-207ENST00000480768 CUX2O14529 1486 aa28.59■■■□□ 2.17
GTF2A2-207ENST00000480768 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
GTF2A2-207ENST00000480768 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
GTF2A2-207ENST00000480768 CFTRP13569 1480 aa28.51■■■□□ 2.15
GTF2A2-207ENST00000480768 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
GTF2A2-207ENST00000480768 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
GTF2A2-207ENST00000480768 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
GTF2A2-207ENST00000480768 MRC2Q9UBG0 1479 aa28.38■■■□□ 2.13
GTF2A2-207ENST00000480768 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
GTF2A2-207ENST00000480768 WDR62O43379 1518 aa28.28■■■□□ 2.12
GTF2A2-207ENST00000480768 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
GTF2A2-207ENST00000480768 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
GTF2A2-207ENST00000480768 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
GTF2A2-207ENST00000480768 DNMBPQ6XZF7 1577 aa27.91■■■□□ 2.06
GTF2A2-207ENST00000480768 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
GTF2A2-207ENST00000480768 IFT140Q96RY7 1462 aa27.78■■■□□ 2.04
GTF2A2-207ENST00000480768 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
GTF2A2-207ENST00000480768 CUX1P39880 1505 aa27.71■■■□□ 2.03
GTF2A2-207ENST00000480768 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.03
GTF2A2-207ENST00000480768 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
GTF2A2-207ENST00000480768 FOXD1Q16676 465 aa27.66■■■□□ 2.02
GTF2A2-207ENST00000480768 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
GTF2A2-207ENST00000480768 RAD54L2Q9Y4B4 1467 aa27.63■■■□□ 2.01
GTF2A2-207ENST00000480768 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
GTF2A2-207ENST00000480768 SOGA1O94964 1423 aa27.59■■■□□ 2.01
GTF2A2-207ENST00000480768 AQRO60306 1485 aaKnown RBP eCLIP27.56■■■□□ 22e-8■□□□□ 8.7
GTF2A2-207ENST00000480768 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
GTF2A2-207ENST00000480768 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
GTF2A2-207ENST00000480768 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
GTF2A2-207ENST00000480768 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
GTF2A2-207ENST00000480768 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
GTF2A2-207ENST00000480768 OSCARQ8IYS5 282 aa27.43■■□□□ 1.98
GTF2A2-207ENST00000480768 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
GTF2A2-207ENST00000480768 CHD1O14646 1710 aa27.38■■□□□ 1.97
GTF2A2-207ENST00000480768 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
GTF2A2-207ENST00000480768 PBRM1Q86U86 1689 aa27.31■■□□□ 1.96
GTF2A2-207ENST00000480768 FBLN2P98095 1184 aa27.3■■□□□ 1.96
GTF2A2-207ENST00000480768 SNAPC4Q5SXM2 1469 aa27.28■■□□□ 1.96
GTF2A2-207ENST00000480768 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
GTF2A2-207ENST00000480768 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
GTF2A2-207ENST00000480768 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
GTF2A2-207ENST00000480768 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
GTF2A2-207ENST00000480768 CHMP7Q8WUX9 453 aaPredicted RBP27.15■■□□□ 1.94
GTF2A2-207ENST00000480768 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
GTF2A2-207ENST00000480768 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
GTF2A2-207ENST00000480768 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
GTF2A2-207ENST00000480768 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
GTF2A2-207ENST00000480768 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
GTF2A2-207ENST00000480768 ADAMTS12P58397 1594 aa27.01■■□□□ 1.91
GTF2A2-207ENST00000480768 ARHGEF11O15085 1522 aa27■■□□□ 1.91
GTF2A2-207ENST00000480768 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
GTF2A2-207ENST00000480768 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
GTF2A2-207ENST00000480768 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
GTF2A2-207ENST00000480768 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
GTF2A2-207ENST00000480768 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
GTF2A2-207ENST00000480768 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
GTF2A2-207ENST00000480768 POTEDQ86YR6 584 aa26.81■■□□□ 1.88
GTF2A2-207ENST00000480768 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
GTF2A2-207ENST00000480768 IGF1RP08069 1367 aa26.79■■□□□ 1.88
GTF2A2-207ENST00000480768 NUP160Q12769 1436 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms