RNA–Protein interactions for RNA: ENST00000480137.1

CCDC136-209, Transcript of coiled-coil domain containing 136, humanhuman

TSL 2

Gene CCDC136, Length 3,732 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-209ENST00000480137 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
CCDC136-209ENST00000480137 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.12
CCDC136-209ENST00000480137 SHROOM4Q9ULL8 1493 aa15.02■□□□□ -0
CCDC136-209ENST00000480137 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
CCDC136-209ENST00000480137 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
CCDC136-209ENST00000480137 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
CCDC136-209ENST00000480137 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
CCDC136-209ENST00000480137 HRCP23327 699 aa14.81□□□□□ -0.04
CCDC136-209ENST00000480137 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
CCDC136-209ENST00000480137 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
CCDC136-209ENST00000480137 ABCC9O60706 1549 aa14.62□□□□□ -0.07
CCDC136-209ENST00000480137 NACADO15069 1562 aa14.62□□□□□ -0.07
CCDC136-209ENST00000480137 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
CCDC136-209ENST00000480137 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
CCDC136-209ENST00000480137 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
CCDC136-209ENST00000480137 LOC105371045A0A1W2PR82 267 aa14.3□□□□□ -0.12
CCDC136-209ENST00000480137 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
CCDC136-209ENST00000480137 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
CCDC136-209ENST00000480137 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
CCDC136-209ENST00000480137 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
CCDC136-209ENST00000480137 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
CCDC136-209ENST00000480137 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
CCDC136-209ENST00000480137 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
CCDC136-209ENST00000480137 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
CCDC136-209ENST00000480137 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
CCDC136-209ENST00000480137 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
CCDC136-209ENST00000480137 SMARCA4P51532 1647 aa13.77□□□□□ -0.2
CCDC136-209ENST00000480137 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
CCDC136-209ENST00000480137 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
CCDC136-209ENST00000480137 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.21
CCDC136-209ENST00000480137 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
CCDC136-209ENST00000480137 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
CCDC136-209ENST00000480137 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
CCDC136-209ENST00000480137 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
CCDC136-209ENST00000480137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
CCDC136-209ENST00000480137 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
CCDC136-209ENST00000480137 WIZO95785 1651 aa13.62□□□□□ -0.23
CCDC136-209ENST00000480137 GTF3C3Q9Y5Q9 886 aa13.6□□□□□ -0.23
CCDC136-209ENST00000480137 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC136-209ENST00000480137 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
CCDC136-209ENST00000480137 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
CCDC136-209ENST00000480137 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
CCDC136-209ENST00000480137 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
CCDC136-209ENST00000480137 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
CCDC136-209ENST00000480137 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CCDC136-209ENST00000480137 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
CCDC136-209ENST00000480137 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
CCDC136-209ENST00000480137 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
CCDC136-209ENST00000480137 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
CCDC136-209ENST00000480137 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
CCDC136-209ENST00000480137 BAZ1BQ9UIG0 1483 aaKnown RBP13.31□□□□□ -0.28
CCDC136-209ENST00000480137 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
CCDC136-209ENST00000480137 MYT1Q01538 1121 aa13.27□□□□□ -0.28
CCDC136-209ENST00000480137 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
CCDC136-209ENST00000480137 MIER1Q8N108 512 aa13.21□□□□□ -0.3
CCDC136-209ENST00000480137 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
CCDC136-209ENST00000480137 CFTRP13569 1480 aa13.1□□□□□ -0.31
CCDC136-209ENST00000480137 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
CCDC136-209ENST00000480137 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
CCDC136-209ENST00000480137 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
CCDC136-209ENST00000480137 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
CCDC136-209ENST00000480137 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
CCDC136-209ENST00000480137 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
CCDC136-209ENST00000480137 SOGA1O94964 1423 aa13.02□□□□□ -0.32
CCDC136-209ENST00000480137 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.33
CCDC136-209ENST00000480137 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
CCDC136-209ENST00000480137 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
CCDC136-209ENST00000480137 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.34
CCDC136-209ENST00000480137 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
CCDC136-209ENST00000480137 SUPT16HQ9Y5B9 1047 aaKnown RBP12.93□□□□□ -0.34
CCDC136-209ENST00000480137 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
CCDC136-209ENST00000480137 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
CCDC136-209ENST00000480137 SYNJ1O43426 1573 aa12.91□□□□□ -0.34
CCDC136-209ENST00000480137 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
CCDC136-209ENST00000480137 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
CCDC136-209ENST00000480137 NESP48681 1621 aa12.89□□□□□ -0.35
CCDC136-209ENST00000480137 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
CCDC136-209ENST00000480137 CUX1P39880 1505 aa12.85□□□□□ -0.35
CCDC136-209ENST00000480137 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
CCDC136-209ENST00000480137 THOC2Q8NI27 1593 aaKnown RBP12.83□□□□□ -0.36
CCDC136-209ENST00000480137 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
CCDC136-209ENST00000480137 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
CCDC136-209ENST00000480137 BCANQ96GW7 911 aa12.8□□□□□ -0.36
CCDC136-209ENST00000480137 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
CCDC136-209ENST00000480137 GOLGA3Q08378 1498 aa12.79□□□□□ -0.36
CCDC136-209ENST00000480137 WDR62O43379 1518 aa12.78□□□□□ -0.36
CCDC136-209ENST00000480137 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.36
CCDC136-209ENST00000480137 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
CCDC136-209ENST00000480137 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
CCDC136-209ENST00000480137 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
CCDC136-209ENST00000480137 CLIP1P30622 1438 aa12.74□□□□□ -0.37
CCDC136-209ENST00000480137 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
CCDC136-209ENST00000480137 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
CCDC136-209ENST00000480137 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
CCDC136-209ENST00000480137 APLP2Q06481 763 aa12.72□□□□□ -0.37
CCDC136-209ENST00000480137 EEA1Q15075 1411 aa12.71□□□□□ -0.38
CCDC136-209ENST00000480137 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
CCDC136-209ENST00000480137 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
CCDC136-209ENST00000480137 VPS8Q8N3P4 1428 aa12.68□□□□□ -0.38
CCDC136-209ENST00000480137 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms