RNA–Protein interactions for RNA: ENST00000480035.1

CNNM3-204, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-204ENST00000480035 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
CNNM3-204ENST00000480035 ABCC9O60706 1549 aa13.33□□□□□ -0.28
CNNM3-204ENST00000480035 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
CNNM3-204ENST00000480035 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
CNNM3-204ENST00000480035 RB1CC1Q8TDY2 1594 aa12.5□□□□□ -0.41
CNNM3-204ENST00000480035 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
CNNM3-204ENST00000480035 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
CNNM3-204ENST00000480035 NACADO15069 1562 aa12.31□□□□□ -0.44
CNNM3-204ENST00000480035 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
CNNM3-204ENST00000480035 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
CNNM3-204ENST00000480035 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
CNNM3-204ENST00000480035 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
CNNM3-204ENST00000480035 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
CNNM3-204ENST00000480035 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
CNNM3-204ENST00000480035 SHROOM4Q9ULL8 1493 aa12□□□□□ -0.49
CNNM3-204ENST00000480035 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
CNNM3-204ENST00000480035 CUX2O14529 1486 aa11.75□□□□□ -0.53
CNNM3-204ENST00000480035 DCAF1Q9Y4B6 1507 aa11.66□□□□□ -0.54
CNNM3-204ENST00000480035 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
CNNM3-204ENST00000480035 ZCCHC6Q5VYS8 1495 aaKnown RBP11.58□□□□□ -0.56
CNNM3-204ENST00000480035 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
CNNM3-204ENST00000480035 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CNNM3-204ENST00000480035 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
CNNM3-204ENST00000480035 NESP48681 1621 aa11.3□□□□□ -0.6
CNNM3-204ENST00000480035 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
CNNM3-204ENST00000480035 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
CNNM3-204ENST00000480035 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
CNNM3-204ENST00000480035 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
CNNM3-204ENST00000480035 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
CNNM3-204ENST00000480035 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
CNNM3-204ENST00000480035 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
CNNM3-204ENST00000480035 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
CNNM3-204ENST00000480035 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
CNNM3-204ENST00000480035 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
CNNM3-204ENST00000480035 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
CNNM3-204ENST00000480035 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
CNNM3-204ENST00000480035 WDR62O43379 1518 aa11.05□□□□□ -0.64
CNNM3-204ENST00000480035 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CNNM3-204ENST00000480035 PEG3Q9GZU2 1588 aa11.02□□□□□ -0.65
CNNM3-204ENST00000480035 AEBP2Q6ZN18 517 aaPredicted RBP11□□□□□ -0.65
CNNM3-204ENST00000480035 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
CNNM3-204ENST00000480035 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
CNNM3-204ENST00000480035 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
CNNM3-204ENST00000480035 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
CNNM3-204ENST00000480035 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
CNNM3-204ENST00000480035 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
CNNM3-204ENST00000480035 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
CNNM3-204ENST00000480035 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
CNNM3-204ENST00000480035 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
CNNM3-204ENST00000480035 CFTRP13569 1480 aa10.79□□□□□ -0.68
CNNM3-204ENST00000480035 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
CNNM3-204ENST00000480035 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
CNNM3-204ENST00000480035 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
CNNM3-204ENST00000480035 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
CNNM3-204ENST00000480035 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CNNM3-204ENST00000480035 WIZO95785 1651 aa10.65□□□□□ -0.7
CNNM3-204ENST00000480035 FBLN2P98095 1184 aa10.64□□□□□ -0.71
CNNM3-204ENST00000480035 EIF4G3O43432 1585 aaKnown RBP10.62□□□□□ -0.71
CNNM3-204ENST00000480035 CHD1O14646 1710 aa10.61□□□□□ -0.71
CNNM3-204ENST00000480035 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
CNNM3-204ENST00000480035 TOPBP1Q92547 1522 aa10.59□□□□□ -0.71
CNNM3-204ENST00000480035 AQRO60306 1485 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■□□□ 13.6
CNNM3-204ENST00000480035 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
CNNM3-204ENST00000480035 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
CNNM3-204ENST00000480035 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
CNNM3-204ENST00000480035 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
CNNM3-204ENST00000480035 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
CNNM3-204ENST00000480035 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
CNNM3-204ENST00000480035 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
CNNM3-204ENST00000480035 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
CNNM3-204ENST00000480035 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
CNNM3-204ENST00000480035 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
CNNM3-204ENST00000480035 SNAPC4Q5SXM2 1469 aa10.45□□□□□ -0.74
CNNM3-204ENST00000480035 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
CNNM3-204ENST00000480035 MAGI1Q96QZ7 1491 aaPredicted RBP10.44□□□□□ -0.74
CNNM3-204ENST00000480035 SOGA1O94964 1423 aa10.42□□□□□ -0.74
CNNM3-204ENST00000480035 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
CNNM3-204ENST00000480035 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
CNNM3-204ENST00000480035 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
CNNM3-204ENST00000480035 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
CNNM3-204ENST00000480035 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
CNNM3-204ENST00000480035 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
CNNM3-204ENST00000480035 FGD5Q6ZNL6 1462 aa10.31□□□□□ -0.76
CNNM3-204ENST00000480035 KIF13AQ9H1H9 1805 aa10.31□□□□□ -0.76
CNNM3-204ENST00000480035 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
CNNM3-204ENST00000480035 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
CNNM3-204ENST00000480035 ABCC10Q5T3U5 1492 aa10.28□□□□□ -0.76
CNNM3-204ENST00000480035 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
CNNM3-204ENST00000480035 NUP160Q12769 1436 aa10.24□□□□□ -0.77
CNNM3-204ENST00000480035 GRIN2AQ12879 1464 aa10.24□□□□□ -0.77
CNNM3-204ENST00000480035 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
CNNM3-204ENST00000480035 KDM6BO15054 1643 aa10.23□□□□□ -0.77
CNNM3-204ENST00000480035 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
CNNM3-204ENST00000480035 CUX1P39880 1505 aa10.22□□□□□ -0.77
CNNM3-204ENST00000480035 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
CNNM3-204ENST00000480035 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
CNNM3-204ENST00000480035 FBXO41Q8TF61 875 aa10.2□□□□□ -0.78
CNNM3-204ENST00000480035 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
CNNM3-204ENST00000480035 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
CNNM3-204ENST00000480035 ABCA5Q8WWZ7 1642 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 330.8 ms