RNA–Protein interactions for RNA: ENST00000479687.6

VAMP7-205, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-205ENST00000479687 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
VAMP7-205ENST00000479687 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
VAMP7-205ENST00000479687 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
VAMP7-205ENST00000479687 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
VAMP7-205ENST00000479687 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
VAMP7-205ENST00000479687 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
VAMP7-205ENST00000479687 FOXD1Q16676 465 aa16.94■□□□□ 0.3
VAMP7-205ENST00000479687 ABCC9O60706 1549 aa16.56■□□□□ 0.24
VAMP7-205ENST00000479687 MSH5O43196 834 aa16.25■□□□□ 0.19
VAMP7-205ENST00000479687 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
VAMP7-205ENST00000479687 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
VAMP7-205ENST00000479687 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
VAMP7-205ENST00000479687 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
VAMP7-205ENST00000479687 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
VAMP7-205ENST00000479687 NACADO15069 1562 aa15.24■□□□□ 0.03
VAMP7-205ENST00000479687 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
VAMP7-205ENST00000479687 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
VAMP7-205ENST00000479687 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
VAMP7-205ENST00000479687 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
VAMP7-205ENST00000479687 ADRA2BP18089 450 aa15.04■□□□□ -0
VAMP7-205ENST00000479687 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
VAMP7-205ENST00000479687 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
VAMP7-205ENST00000479687 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
VAMP7-205ENST00000479687 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
VAMP7-205ENST00000479687 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
VAMP7-205ENST00000479687 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
VAMP7-205ENST00000479687 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
VAMP7-205ENST00000479687 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
VAMP7-205ENST00000479687 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
VAMP7-205ENST00000479687 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
VAMP7-205ENST00000479687 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
VAMP7-205ENST00000479687 CUX2O14529 1486 aa14.4□□□□□ -0.1
VAMP7-205ENST00000479687 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
VAMP7-205ENST00000479687 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
VAMP7-205ENST00000479687 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
VAMP7-205ENST00000479687 NESP48681 1621 aa14.08□□□□□ -0.16
VAMP7-205ENST00000479687 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
VAMP7-205ENST00000479687 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
VAMP7-205ENST00000479687 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
VAMP7-205ENST00000479687 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
VAMP7-205ENST00000479687 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
VAMP7-205ENST00000479687 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
VAMP7-205ENST00000479687 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
VAMP7-205ENST00000479687 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
VAMP7-205ENST00000479687 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
VAMP7-205ENST00000479687 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
VAMP7-205ENST00000479687 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
VAMP7-205ENST00000479687 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
VAMP7-205ENST00000479687 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.21
VAMP7-205ENST00000479687 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
VAMP7-205ENST00000479687 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
VAMP7-205ENST00000479687 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
VAMP7-205ENST00000479687 WDR62O43379 1518 aa13.69□□□□□ -0.22
VAMP7-205ENST00000479687 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
VAMP7-205ENST00000479687 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
VAMP7-205ENST00000479687 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
VAMP7-205ENST00000479687 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
VAMP7-205ENST00000479687 RIMBP3CA6NJZ7 1639 aa13.59□□□□□ -0.23
VAMP7-205ENST00000479687 RIMBP3BA6NNM3 1639 aa13.59□□□□□ -0.23
VAMP7-205ENST00000479687 RIMBP3Q9UFD9 1639 aa13.59□□□□□ -0.23
VAMP7-205ENST00000479687 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
VAMP7-205ENST00000479687 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
VAMP7-205ENST00000479687 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
VAMP7-205ENST00000479687 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
VAMP7-205ENST00000479687 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
VAMP7-205ENST00000479687 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
VAMP7-205ENST00000479687 WIZO95785 1651 aa13.43□□□□□ -0.26
VAMP7-205ENST00000479687 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
VAMP7-205ENST00000479687 POTEHQ6S545 545 aa13.39□□□□□ -0.27
VAMP7-205ENST00000479687 KCNA4P22459 653 aa13.38□□□□□ -0.27
VAMP7-205ENST00000479687 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
VAMP7-205ENST00000479687 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
VAMP7-205ENST00000479687 CFTRP13569 1480 aa13.36□□□□□ -0.27
VAMP7-205ENST00000479687 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-205ENST00000479687 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
VAMP7-205ENST00000479687 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
VAMP7-205ENST00000479687 CHD1O14646 1710 aa13.27□□□□□ -0.28
VAMP7-205ENST00000479687 FBLN2P98095 1184 aa13.27□□□□□ -0.29
VAMP7-205ENST00000479687 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
VAMP7-205ENST00000479687 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
VAMP7-205ENST00000479687 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-205ENST00000479687 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
VAMP7-205ENST00000479687 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
VAMP7-205ENST00000479687 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■■■ 26.9
VAMP7-205ENST00000479687 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
VAMP7-205ENST00000479687 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
VAMP7-205ENST00000479687 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
VAMP7-205ENST00000479687 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
VAMP7-205ENST00000479687 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
VAMP7-205ENST00000479687 TDRD9Q8NDG6 1382 aaKnown RBP13.04□□□□□ -0.32
VAMP7-205ENST00000479687 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
VAMP7-205ENST00000479687 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
VAMP7-205ENST00000479687 CHMP7Q8WUX9 453 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-205ENST00000479687 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-205ENST00000479687 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-205ENST00000479687 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
VAMP7-205ENST00000479687 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
VAMP7-205ENST00000479687 SOGA1O94964 1423 aa12.97□□□□□ -0.33
VAMP7-205ENST00000479687 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
VAMP7-205ENST00000479687 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms