RNA–Protein interactions for RNA: ENST00000479207.1

NELFCD-207, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 3

Gene NELFCD, Length 1,112 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-207ENST00000479207 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
NELFCD-207ENST00000479207 ABCC9O60706 1549 aa26.95■■□□□ 1.91
NELFCD-207ENST00000479207 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
NELFCD-207ENST00000479207 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
NELFCD-207ENST00000479207 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
NELFCD-207ENST00000479207 NACADO15069 1562 aa24.93■■□□□ 1.58
NELFCD-207ENST00000479207 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
NELFCD-207ENST00000479207 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.578e-7■■□□□ 12.1
NELFCD-207ENST00000479207 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
NELFCD-207ENST00000479207 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
NELFCD-207ENST00000479207 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
NELFCD-207ENST00000479207 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
NELFCD-207ENST00000479207 MYO15BQ96JP2 1530 aa24.33■■□□□ 1.49
NELFCD-207ENST00000479207 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
NELFCD-207ENST00000479207 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
NELFCD-207ENST00000479207 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
NELFCD-207ENST00000479207 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
NELFCD-207ENST00000479207 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
NELFCD-207ENST00000479207 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
NELFCD-207ENST00000479207 CUX2O14529 1486 aa23.54■■□□□ 1.36
NELFCD-207ENST00000479207 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
NELFCD-207ENST00000479207 NCAPD3P42695 1498 aa23■■□□□ 1.27
NELFCD-207ENST00000479207 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
NELFCD-207ENST00000479207 NESP48681 1621 aa22.98■■□□□ 1.27
NELFCD-207ENST00000479207 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
NELFCD-207ENST00000479207 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
NELFCD-207ENST00000479207 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
NELFCD-207ENST00000479207 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
NELFCD-207ENST00000479207 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
NELFCD-207ENST00000479207 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
NELFCD-207ENST00000479207 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
NELFCD-207ENST00000479207 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
NELFCD-207ENST00000479207 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
NELFCD-207ENST00000479207 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
NELFCD-207ENST00000479207 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
NELFCD-207ENST00000479207 WDR62O43379 1518 aa22.43■■□□□ 1.18
NELFCD-207ENST00000479207 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
NELFCD-207ENST00000479207 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
NELFCD-207ENST00000479207 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
NELFCD-207ENST00000479207 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.15
NELFCD-207ENST00000479207 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.15
NELFCD-207ENST00000479207 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.15
NELFCD-207ENST00000479207 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
NELFCD-207ENST00000479207 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
NELFCD-207ENST00000479207 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
NELFCD-207ENST00000479207 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
NELFCD-207ENST00000479207 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
NELFCD-207ENST00000479207 WIZO95785 1651 aa21.95■■□□□ 1.1
NELFCD-207ENST00000479207 CFTRP13569 1480 aa21.87■■□□□ 1.09
NELFCD-207ENST00000479207 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
NELFCD-207ENST00000479207 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
NELFCD-207ENST00000479207 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
NELFCD-207ENST00000479207 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
NELFCD-207ENST00000479207 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
NELFCD-207ENST00000479207 CHD1O14646 1710 aa21.72■■□□□ 1.07
NELFCD-207ENST00000479207 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
NELFCD-207ENST00000479207 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
NELFCD-207ENST00000479207 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
NELFCD-207ENST00000479207 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
NELFCD-207ENST00000479207 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
NELFCD-207ENST00000479207 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
NELFCD-207ENST00000479207 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
NELFCD-207ENST00000479207 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.031e-10■■■■□ 24.3
NELFCD-207ENST00000479207 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
NELFCD-207ENST00000479207 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
NELFCD-207ENST00000479207 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
NELFCD-207ENST00000479207 FBLN2P98095 1184 aa21.32■■□□□ 1
NELFCD-207ENST00000479207 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
NELFCD-207ENST00000479207 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
NELFCD-207ENST00000479207 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
NELFCD-207ENST00000479207 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
NELFCD-207ENST00000479207 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
NELFCD-207ENST00000479207 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
NELFCD-207ENST00000479207 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
NELFCD-207ENST00000479207 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
NELFCD-207ENST00000479207 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
NELFCD-207ENST00000479207 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
NELFCD-207ENST00000479207 SOGA1O94964 1423 aa21.07■□□□□ 0.96
NELFCD-207ENST00000479207 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
NELFCD-207ENST00000479207 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
NELFCD-207ENST00000479207 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
NELFCD-207ENST00000479207 PBRM1Q86U86 1689 aa21.04■□□□□ 0.96
NELFCD-207ENST00000479207 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
NELFCD-207ENST00000479207 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
NELFCD-207ENST00000479207 CUX1P39880 1505 aa20.94■□□□□ 0.94
NELFCD-207ENST00000479207 ILDR1Q86SU0 546 aaPredicted RBP20.9■□□□□ 0.94
NELFCD-207ENST00000479207 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
NELFCD-207ENST00000479207 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
NELFCD-207ENST00000479207 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
NELFCD-207ENST00000479207 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
NELFCD-207ENST00000479207 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
NELFCD-207ENST00000479207 NUP160Q12769 1436 aa20.78■□□□□ 0.92
NELFCD-207ENST00000479207 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
NELFCD-207ENST00000479207 KDM4FA0A1W2PPD8 638 aa20.75■□□□□ 0.91
NELFCD-207ENST00000479207 DIP2BQ9P265 1576 aa20.71■□□□□ 0.91
NELFCD-207ENST00000479207 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
NELFCD-207ENST00000479207 KDM6BO15054 1643 aa20.68■□□□□ 0.9
NELFCD-207ENST00000479207 MAPKBP1O60336 1514 aa20.64■□□□□ 0.9
NELFCD-207ENST00000479207 ADCY10Q96PN6 1610 aa20.58■□□□□ 0.89
NELFCD-207ENST00000479207 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms