RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
FXR1-213ENST00000479176 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
FXR1-213ENST00000479176 NISCHQ9Y2I1 1504 aa25.95■■□□□ 1.74
FXR1-213ENST00000479176 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
FXR1-213ENST00000479176 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
FXR1-213ENST00000479176 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
FXR1-213ENST00000479176 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
FXR1-213ENST00000479176 ABCC9O60706 1549 aa22.62■■□□□ 1.21
FXR1-213ENST00000479176 FOXD1Q16676 465 aa22.61■■□□□ 1.21
FXR1-213ENST00000479176 ADRA2BP18089 450 aa21.87■■□□□ 1.09
FXR1-213ENST00000479176 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
FXR1-213ENST00000479176 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
FXR1-213ENST00000479176 NACADO15069 1562 aa21.74■■□□□ 1.07
FXR1-213ENST00000479176 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
FXR1-213ENST00000479176 ZCCHC6Q5VYS8 1495 aaKnown RBP21.62■■□□□ 1.05
FXR1-213ENST00000479176 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
FXR1-213ENST00000479176 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
FXR1-213ENST00000479176 PIAS4Q8N2W9 510 aaPredicted RBP21.39■■□□□ 1.01
FXR1-213ENST00000479176 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
FXR1-213ENST00000479176 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
FXR1-213ENST00000479176 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
FXR1-213ENST00000479176 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
FXR1-213ENST00000479176 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
FXR1-213ENST00000479176 MSH5O43196 834 aa20.84■□□□□ 0.93
FXR1-213ENST00000479176 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
FXR1-213ENST00000479176 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
FXR1-213ENST00000479176 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
FXR1-213ENST00000479176 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
FXR1-213ENST00000479176 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
FXR1-213ENST00000479176 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
FXR1-213ENST00000479176 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
FXR1-213ENST00000479176 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
FXR1-213ENST00000479176 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
FXR1-213ENST00000479176 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
FXR1-213ENST00000479176 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
FXR1-213ENST00000479176 KCNA4P22459 653 aa20.01■□□□□ 0.79
FXR1-213ENST00000479176 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
FXR1-213ENST00000479176 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
FXR1-213ENST00000479176 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
FXR1-213ENST00000479176 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
FXR1-213ENST00000479176 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
FXR1-213ENST00000479176 MAPK8IP2Q13387 824 aaPredicted RBP19.78■□□□□ 0.76
FXR1-213ENST00000479176 WIZO95785 1651 aa19.78■□□□□ 0.76
FXR1-213ENST00000479176 CNKSR2Q8WXI2 1034 aa19.73■□□□□ 0.75
FXR1-213ENST00000479176 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
FXR1-213ENST00000479176 NESP48681 1621 aa19.58■□□□□ 0.72
FXR1-213ENST00000479176 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
FXR1-213ENST00000479176 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
FXR1-213ENST00000479176 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
FXR1-213ENST00000479176 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
FXR1-213ENST00000479176 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
FXR1-213ENST00000479176 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
FXR1-213ENST00000479176 KIF21AQ7Z4S6 1674 aa19.39■□□□□ 0.69
FXR1-213ENST00000479176 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
FXR1-213ENST00000479176 CUX2O14529 1486 aa19.36■□□□□ 0.69
FXR1-213ENST00000479176 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
FXR1-213ENST00000479176 CFTRP13569 1480 aa19.34■□□□□ 0.69
FXR1-213ENST00000479176 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
FXR1-213ENST00000479176 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
FXR1-213ENST00000479176 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
FXR1-213ENST00000479176 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
FXR1-213ENST00000479176 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
FXR1-213ENST00000479176 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
FXR1-213ENST00000479176 WDR62O43379 1518 aa19.17■□□□□ 0.66
FXR1-213ENST00000479176 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
FXR1-213ENST00000479176 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
FXR1-213ENST00000479176 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
FXR1-213ENST00000479176 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
FXR1-213ENST00000479176 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
FXR1-213ENST00000479176 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
FXR1-213ENST00000479176 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
FXR1-213ENST00000479176 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
FXR1-213ENST00000479176 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
FXR1-213ENST00000479176 CUX1P39880 1505 aa18.76■□□□□ 0.59
FXR1-213ENST00000479176 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
FXR1-213ENST00000479176 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
FXR1-213ENST00000479176 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
FXR1-213ENST00000479176 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
FXR1-213ENST00000479176 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
FXR1-213ENST00000479176 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
FXR1-213ENST00000479176 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
FXR1-213ENST00000479176 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
FXR1-213ENST00000479176 SOGA1O94964 1423 aa18.65■□□□□ 0.58
FXR1-213ENST00000479176 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
FXR1-213ENST00000479176 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
FXR1-213ENST00000479176 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
FXR1-213ENST00000479176 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
FXR1-213ENST00000479176 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.577e-8■■■□□ 16
FXR1-213ENST00000479176 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
FXR1-213ENST00000479176 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
FXR1-213ENST00000479176 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
FXR1-213ENST00000479176 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
FXR1-213ENST00000479176 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
FXR1-213ENST00000479176 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
FXR1-213ENST00000479176 CHD1O14646 1710 aa18.47■□□□□ 0.55
FXR1-213ENST00000479176 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
FXR1-213ENST00000479176 GRIN2BQ13224 1484 aa18.46■□□□□ 0.54
FXR1-213ENST00000479176 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
FXR1-213ENST00000479176 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
FXR1-213ENST00000479176 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms