RNA–Protein interactions for RNA: ENST00000479096.1

HM13-216, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-216ENST00000479096 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
HM13-216ENST00000479096 ABCC9O60706 1549 aa24.13■■□□□ 1.45
HM13-216ENST00000479096 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
HM13-216ENST00000479096 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
HM13-216ENST00000479096 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
HM13-216ENST00000479096 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
HM13-216ENST00000479096 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
HM13-216ENST00000479096 NACADO15069 1562 aa22.13■■□□□ 1.13
HM13-216ENST00000479096 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
HM13-216ENST00000479096 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
HM13-216ENST00000479096 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
HM13-216ENST00000479096 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
HM13-216ENST00000479096 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
HM13-216ENST00000479096 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
HM13-216ENST00000479096 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
HM13-216ENST00000479096 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
HM13-216ENST00000479096 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
HM13-216ENST00000479096 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
HM13-216ENST00000479096 CUX2O14529 1486 aa21.16■□□□□ 0.98
HM13-216ENST00000479096 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
HM13-216ENST00000479096 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
HM13-216ENST00000479096 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
HM13-216ENST00000479096 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
HM13-216ENST00000479096 NESP48681 1621 aa20.43■□□□□ 0.86
HM13-216ENST00000479096 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
HM13-216ENST00000479096 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
HM13-216ENST00000479096 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
HM13-216ENST00000479096 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
HM13-216ENST00000479096 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
HM13-216ENST00000479096 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
HM13-216ENST00000479096 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
HM13-216ENST00000479096 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
HM13-216ENST00000479096 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
HM13-216ENST00000479096 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
HM13-216ENST00000479096 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
HM13-216ENST00000479096 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
HM13-216ENST00000479096 KIF21AQ7Z4S6 1674 aa20.02■□□□□ 0.8
HM13-216ENST00000479096 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
HM13-216ENST00000479096 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
HM13-216ENST00000479096 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
HM13-216ENST00000479096 WDR62O43379 1518 aa19.89■□□□□ 0.77
HM13-216ENST00000479096 WIZO95785 1651 aa19.87■□□□□ 0.77
HM13-216ENST00000479096 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
HM13-216ENST00000479096 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
HM13-216ENST00000479096 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
HM13-216ENST00000479096 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
HM13-216ENST00000479096 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
HM13-216ENST00000479096 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
HM13-216ENST00000479096 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
HM13-216ENST00000479096 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
HM13-216ENST00000479096 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
HM13-216ENST00000479096 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
HM13-216ENST00000479096 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
HM13-216ENST00000479096 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
HM13-216ENST00000479096 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
HM13-216ENST00000479096 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
HM13-216ENST00000479096 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
HM13-216ENST00000479096 CFTRP13569 1480 aa19.4■□□□□ 0.7
HM13-216ENST00000479096 ZNF608Q9ULD9 1512 aaPredicted RBP19.4■□□□□ 0.7
HM13-216ENST00000479096 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
HM13-216ENST00000479096 FBLN2P98095 1184 aa19.31■□□□□ 0.68
HM13-216ENST00000479096 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
HM13-216ENST00000479096 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
HM13-216ENST00000479096 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.66
HM13-216ENST00000479096 CHD1O14646 1710 aa19.14■□□□□ 0.66
HM13-216ENST00000479096 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
HM13-216ENST00000479096 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
HM13-216ENST00000479096 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
HM13-216ENST00000479096 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
HM13-216ENST00000479096 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
HM13-216ENST00000479096 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
HM13-216ENST00000479096 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
HM13-216ENST00000479096 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
HM13-216ENST00000479096 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
HM13-216ENST00000479096 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
HM13-216ENST00000479096 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
HM13-216ENST00000479096 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
HM13-216ENST00000479096 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
HM13-216ENST00000479096 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
HM13-216ENST00000479096 SOGA1O94964 1423 aa18.83■□□□□ 0.6
HM13-216ENST00000479096 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
HM13-216ENST00000479096 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
HM13-216ENST00000479096 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
HM13-216ENST00000479096 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
HM13-216ENST00000479096 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
HM13-216ENST00000479096 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
HM13-216ENST00000479096 CUX1P39880 1505 aa18.73■□□□□ 0.59
HM13-216ENST00000479096 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
HM13-216ENST00000479096 EEA1Q15075 1411 aa18.72■□□□□ 0.59
HM13-216ENST00000479096 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
HM13-216ENST00000479096 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
HM13-216ENST00000479096 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
HM13-216ENST00000479096 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
HM13-216ENST00000479096 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
HM13-216ENST00000479096 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
HM13-216ENST00000479096 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.57
HM13-216ENST00000479096 RUSC2Q8N2Y8 1516 aa18.56■□□□□ 0.56
HM13-216ENST00000479096 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
HM13-216ENST00000479096 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
HM13-216ENST00000479096 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms