RNA–Protein interactions for RNA: ENST00000476044.5

PLS1-207, Transcript of plastin 1, humanhuman

TSL 5

Gene PLS1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-207ENST00000476044 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
PLS1-207ENST00000476044 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
PLS1-207ENST00000476044 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
PLS1-207ENST00000476044 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
PLS1-207ENST00000476044 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
PLS1-207ENST00000476044 ABCC9O60706 1549 aa19.56■□□□□ 0.72
PLS1-207ENST00000476044 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
PLS1-207ENST00000476044 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
PLS1-207ENST00000476044 NACADO15069 1562 aa18.54■□□□□ 0.56
PLS1-207ENST00000476044 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
PLS1-207ENST00000476044 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
PLS1-207ENST00000476044 FOXD1Q16676 465 aa18.38■□□□□ 0.53
PLS1-207ENST00000476044 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
PLS1-207ENST00000476044 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
PLS1-207ENST00000476044 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
PLS1-207ENST00000476044 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
PLS1-207ENST00000476044 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
PLS1-207ENST00000476044 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
PLS1-207ENST00000476044 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
PLS1-207ENST00000476044 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
PLS1-207ENST00000476044 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
PLS1-207ENST00000476044 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
PLS1-207ENST00000476044 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
PLS1-207ENST00000476044 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
PLS1-207ENST00000476044 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PLS1-207ENST00000476044 ADRA2BP18089 450 aa17.31■□□□□ 0.36
PLS1-207ENST00000476044 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
PLS1-207ENST00000476044 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
PLS1-207ENST00000476044 MSH5O43196 834 aa17.13■□□□□ 0.33
PLS1-207ENST00000476044 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
PLS1-207ENST00000476044 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
PLS1-207ENST00000476044 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
PLS1-207ENST00000476044 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
PLS1-207ENST00000476044 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
PLS1-207ENST00000476044 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
PLS1-207ENST00000476044 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
PLS1-207ENST00000476044 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
PLS1-207ENST00000476044 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
PLS1-207ENST00000476044 CUX2O14529 1486 aa16.86■□□□□ 0.29
PLS1-207ENST00000476044 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
PLS1-207ENST00000476044 NESP48681 1621 aa16.81■□□□□ 0.28
PLS1-207ENST00000476044 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
PLS1-207ENST00000476044 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
PLS1-207ENST00000476044 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
PLS1-207ENST00000476044 WIZO95785 1651 aa16.6■□□□□ 0.25
PLS1-207ENST00000476044 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
PLS1-207ENST00000476044 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
PLS1-207ENST00000476044 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
PLS1-207ENST00000476044 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
PLS1-207ENST00000476044 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
PLS1-207ENST00000476044 CFTRP13569 1480 aa16.43■□□□□ 0.22
PLS1-207ENST00000476044 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
PLS1-207ENST00000476044 WDR62O43379 1518 aa16.41■□□□□ 0.22
PLS1-207ENST00000476044 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
PLS1-207ENST00000476044 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
PLS1-207ENST00000476044 CCDC88BA6NC98 1476 aa16.28■□□□□ 0.2
PLS1-207ENST00000476044 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
PLS1-207ENST00000476044 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
PLS1-207ENST00000476044 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
PLS1-207ENST00000476044 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
PLS1-207ENST00000476044 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
PLS1-207ENST00000476044 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
PLS1-207ENST00000476044 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PLS1-207ENST00000476044 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
PLS1-207ENST00000476044 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
PLS1-207ENST00000476044 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
PLS1-207ENST00000476044 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
PLS1-207ENST00000476044 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
PLS1-207ENST00000476044 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
PLS1-207ENST00000476044 SOGA1O94964 1423 aa15.89■□□□□ 0.13
PLS1-207ENST00000476044 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
PLS1-207ENST00000476044 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
PLS1-207ENST00000476044 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
PLS1-207ENST00000476044 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
PLS1-207ENST00000476044 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
PLS1-207ENST00000476044 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
PLS1-207ENST00000476044 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
PLS1-207ENST00000476044 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
PLS1-207ENST00000476044 FBLN2P98095 1184 aa15.82■□□□□ 0.12
PLS1-207ENST00000476044 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
PLS1-207ENST00000476044 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
PLS1-207ENST00000476044 CUX1P39880 1505 aa15.81■□□□□ 0.12
PLS1-207ENST00000476044 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
PLS1-207ENST00000476044 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
PLS1-207ENST00000476044 CHD1O14646 1710 aa15.76■□□□□ 0.11
PLS1-207ENST00000476044 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
PLS1-207ENST00000476044 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
PLS1-207ENST00000476044 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
PLS1-207ENST00000476044 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.11
PLS1-207ENST00000476044 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
PLS1-207ENST00000476044 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
PLS1-207ENST00000476044 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
PLS1-207ENST00000476044 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
PLS1-207ENST00000476044 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
PLS1-207ENST00000476044 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
PLS1-207ENST00000476044 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
PLS1-207ENST00000476044 SYNJ1O43426 1573 aa15.63■□□□□ 0.09
PLS1-207ENST00000476044 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
PLS1-207ENST00000476044 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
PLS1-207ENST00000476044 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms