RNA–Protein interactions for RNA: ENST00000474231.5

DMD-222, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 5,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-222ENST00000474231 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
DMD-222ENST00000474231 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
DMD-222ENST00000474231 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
DMD-222ENST00000474231 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
DMD-222ENST00000474231 HRCP23327 699 aa10.47□□□□□ -0.73
DMD-222ENST00000474231 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
DMD-222ENST00000474231 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
DMD-222ENST00000474231 CHIC1Q5VXU3 224 aa10.26□□□□□ -0.77
DMD-222ENST00000474231 ZEB1P37275 1124 aaPredicted RBP10.24□□□□□ -0.77
DMD-222ENST00000474231 TRIM26Q12899 539 aaPredicted RBP10.14□□□□□ -0.79
DMD-222ENST00000474231 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
DMD-222ENST00000474231 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
DMD-222ENST00000474231 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
DMD-222ENST00000474231 MYT1Q01538 1121 aa10.03□□□□□ -0.8
DMD-222ENST00000474231 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
DMD-222ENST00000474231 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
DMD-222ENST00000474231 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
DMD-222ENST00000474231 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
DMD-222ENST00000474231 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
DMD-222ENST00000474231 FAM9AQ8IZU1 332 aaPredicted RBP9.83□□□□□ -0.84
DMD-222ENST00000474231 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
DMD-222ENST00000474231 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
DMD-222ENST00000474231 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.85
DMD-222ENST00000474231 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
DMD-222ENST00000474231 DIEXFQ68CQ4 756 aaKnown RBP9.67□□□□□ -0.86
DMD-222ENST00000474231 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
DMD-222ENST00000474231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
DMD-222ENST00000474231 APLP2Q06481 763 aa9.56□□□□□ -0.88
DMD-222ENST00000474231 ABCC9O60706 1549 aa9.56□□□□□ -0.88
DMD-222ENST00000474231 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
DMD-222ENST00000474231 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
DMD-222ENST00000474231 TTBK1Q5TCY1 1321 aaPredicted RBP9.54□□□□□ -0.88
DMD-222ENST00000474231 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
DMD-222ENST00000474231 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
DMD-222ENST00000474231 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
DMD-222ENST00000474231 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
DMD-222ENST00000474231 SCRIBQ14160 1630 aa9.48□□□□□ -0.89
DMD-222ENST00000474231 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
DMD-222ENST00000474231 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
DMD-222ENST00000474231 EEA1Q15075 1411 aa9.34□□□□□ -0.91
DMD-222ENST00000474231 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
DMD-222ENST00000474231 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
DMD-222ENST00000474231 TNIKQ9UKE5 1360 aa9.32□□□□□ -0.92
DMD-222ENST00000474231 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
DMD-222ENST00000474231 NEFLP07196 543 aa9.3□□□□□ -0.92
DMD-222ENST00000474231 MIER1Q8N108 512 aa9.28□□□□□ -0.92
DMD-222ENST00000474231 NACADO15069 1562 aa9.28□□□□□ -0.92
DMD-222ENST00000474231 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
DMD-222ENST00000474231 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
DMD-222ENST00000474231 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
DMD-222ENST00000474231 RANGAP1P46060 587 aaPredicted RBP9.22□□□□□ -0.93
DMD-222ENST00000474231 BAZ1AQ9NRL2 1556 aaPredicted RBP9.22□□□□□ -0.93
DMD-222ENST00000474231 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
DMD-222ENST00000474231 CLIP1P30622 1438 aa9.17□□□□□ -0.94
DMD-222ENST00000474231 CEP164Q9UPV0 1460 aa9.17□□□□□ -0.94
DMD-222ENST00000474231 WIZO95785 1651 aa9.16□□□□□ -0.94
DMD-222ENST00000474231 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 SOGA1O94964 1423 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 TOP2AP11388 1531 aaKnown RBP9.14□□□□□ -0.95
DMD-222ENST00000474231 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
DMD-222ENST00000474231 ABCC8Q09428 1581 aa9.11□□□□□ -0.95
DMD-222ENST00000474231 ATP1B4Q9UN42 357 aaPredicted RBP9.11□□□□□ -0.95
DMD-222ENST00000474231 VPS8Q8N3P4 1428 aa9.1□□□□□ -0.95
DMD-222ENST00000474231 ITGAEP38570 1179 aa9.07□□□□□ -0.96
DMD-222ENST00000474231 BCANQ96GW7 911 aa9.07□□□□□ -0.96
DMD-222ENST00000474231 ANP32CO43423 234 aa9.06□□□□□ -0.96
DMD-222ENST00000474231 FKBP8Q14318 412 aa9.05□□□□□ -0.96
DMD-222ENST00000474231 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
DMD-222ENST00000474231 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
DMD-222ENST00000474231 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
DMD-222ENST00000474231 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
DMD-222ENST00000474231 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
DMD-222ENST00000474231 SMARCA2P51531 1590 aa9.01□□□□□ -0.97
DMD-222ENST00000474231 SMARCA4P51532 1647 aa9□□□□□ -0.97
DMD-222ENST00000474231 DHX57Q6P158 1386 aaKnown RBP8.98□□□□□ -0.97
DMD-222ENST00000474231 KIF21BO75037 1637 aa8.98□□□□□ -0.97
DMD-222ENST00000474231 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
DMD-222ENST00000474231 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
DMD-222ENST00000474231 DDX10Q13206 875 aaKnown RBP8.96□□□□□ -0.97
DMD-222ENST00000474231 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.97
DMD-222ENST00000474231 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
DMD-222ENST00000474231 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
DMD-222ENST00000474231 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
DMD-222ENST00000474231 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
DMD-222ENST00000474231 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
DMD-222ENST00000474231 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
DMD-222ENST00000474231 TONSLQ96HA7 1378 aa8.9□□□□□ -0.99
DMD-222ENST00000474231 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
DMD-222ENST00000474231 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
DMD-222ENST00000474231 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
DMD-222ENST00000474231 SETD5Q9C0A6 1442 aa8.87□□□□□ -0.99
DMD-222ENST00000474231 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
DMD-222ENST00000474231 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
DMD-222ENST00000474231 RRBP1Q9P2E9 1410 aaKnown RBP8.86□□□□□ -0.99
DMD-222ENST00000474231 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
DMD-222ENST00000474231 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
DMD-222ENST00000474231 ERICH3Q5RHP9 1530 aa8.84□□□□□ -0.99
DMD-222ENST00000474231 SYNJ1O43426 1573 aa8.82□□□□□ -1
DMD-222ENST00000474231 FHAD1B1AJZ9 1412 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms