RNA–Protein interactions for RNA: ENST00000471022.5

ZC3HC1-206, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5

Gene ZC3HC1, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-206ENST00000471022 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
ZC3HC1-206ENST00000471022 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
ZC3HC1-206ENST00000471022 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
ZC3HC1-206ENST00000471022 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
ZC3HC1-206ENST00000471022 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
ZC3HC1-206ENST00000471022 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
ZC3HC1-206ENST00000471022 ABCC9O60706 1549 aa19.13■□□□□ 0.65
ZC3HC1-206ENST00000471022 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
ZC3HC1-206ENST00000471022 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
ZC3HC1-206ENST00000471022 NACADO15069 1562 aa18.65■□□□□ 0.58
ZC3HC1-206ENST00000471022 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
ZC3HC1-206ENST00000471022 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
ZC3HC1-206ENST00000471022 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
ZC3HC1-206ENST00000471022 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
ZC3HC1-206ENST00000471022 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
ZC3HC1-206ENST00000471022 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
ZC3HC1-206ENST00000471022 FOXD1Q16676 465 aa17.97■□□□□ 0.47
ZC3HC1-206ENST00000471022 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
ZC3HC1-206ENST00000471022 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
ZC3HC1-206ENST00000471022 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
ZC3HC1-206ENST00000471022 ADRA2BP18089 450 aa17.57■□□□□ 0.4
ZC3HC1-206ENST00000471022 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
ZC3HC1-206ENST00000471022 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
ZC3HC1-206ENST00000471022 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
ZC3HC1-206ENST00000471022 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
ZC3HC1-206ENST00000471022 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
ZC3HC1-206ENST00000471022 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
ZC3HC1-206ENST00000471022 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
ZC3HC1-206ENST00000471022 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
ZC3HC1-206ENST00000471022 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
ZC3HC1-206ENST00000471022 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
ZC3HC1-206ENST00000471022 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
ZC3HC1-206ENST00000471022 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
ZC3HC1-206ENST00000471022 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
ZC3HC1-206ENST00000471022 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
ZC3HC1-206ENST00000471022 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
ZC3HC1-206ENST00000471022 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
ZC3HC1-206ENST00000471022 WIZO95785 1651 aa16.95■□□□□ 0.3
ZC3HC1-206ENST00000471022 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
ZC3HC1-206ENST00000471022 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
ZC3HC1-206ENST00000471022 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
ZC3HC1-206ENST00000471022 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
ZC3HC1-206ENST00000471022 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
ZC3HC1-206ENST00000471022 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
ZC3HC1-206ENST00000471022 CFTRP13569 1480 aa16.61■□□□□ 0.25
ZC3HC1-206ENST00000471022 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
ZC3HC1-206ENST00000471022 NESP48681 1621 aa16.53■□□□□ 0.24
ZC3HC1-206ENST00000471022 MSH5O43196 834 aa16.51■□□□□ 0.23
ZC3HC1-206ENST00000471022 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
ZC3HC1-206ENST00000471022 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
ZC3HC1-206ENST00000471022 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
ZC3HC1-206ENST00000471022 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
ZC3HC1-206ENST00000471022 KCNA4P22459 653 aa16.43■□□□□ 0.22
ZC3HC1-206ENST00000471022 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
ZC3HC1-206ENST00000471022 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
ZC3HC1-206ENST00000471022 CUX2O14529 1486 aa16.38■□□□□ 0.21
ZC3HC1-206ENST00000471022 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
ZC3HC1-206ENST00000471022 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
ZC3HC1-206ENST00000471022 WDR62O43379 1518 aa16.29■□□□□ 0.2
ZC3HC1-206ENST00000471022 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
ZC3HC1-206ENST00000471022 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
ZC3HC1-206ENST00000471022 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
ZC3HC1-206ENST00000471022 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
ZC3HC1-206ENST00000471022 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
ZC3HC1-206ENST00000471022 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
ZC3HC1-206ENST00000471022 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
ZC3HC1-206ENST00000471022 SOGA1O94964 1423 aa16.08■□□□□ 0.16
ZC3HC1-206ENST00000471022 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
ZC3HC1-206ENST00000471022 CUX1P39880 1505 aa16.06■□□□□ 0.16
ZC3HC1-206ENST00000471022 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
ZC3HC1-206ENST00000471022 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
ZC3HC1-206ENST00000471022 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
ZC3HC1-206ENST00000471022 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
ZC3HC1-206ENST00000471022 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
ZC3HC1-206ENST00000471022 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
ZC3HC1-206ENST00000471022 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
ZC3HC1-206ENST00000471022 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
ZC3HC1-206ENST00000471022 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
ZC3HC1-206ENST00000471022 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
ZC3HC1-206ENST00000471022 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
ZC3HC1-206ENST00000471022 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
ZC3HC1-206ENST00000471022 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
ZC3HC1-206ENST00000471022 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
ZC3HC1-206ENST00000471022 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
ZC3HC1-206ENST00000471022 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
ZC3HC1-206ENST00000471022 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.133e-6■■■□□ 16.9
ZC3HC1-206ENST00000471022 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
ZC3HC1-206ENST00000471022 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
ZC3HC1-206ENST00000471022 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
ZC3HC1-206ENST00000471022 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
ZC3HC1-206ENST00000471022 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
ZC3HC1-206ENST00000471022 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
ZC3HC1-206ENST00000471022 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
ZC3HC1-206ENST00000471022 FBLN2P98095 1184 aa15.76■□□□□ 0.11
ZC3HC1-206ENST00000471022 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
ZC3HC1-206ENST00000471022 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
ZC3HC1-206ENST00000471022 EEA1Q15075 1411 aa15.75■□□□□ 0.11
ZC3HC1-206ENST00000471022 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
ZC3HC1-206ENST00000471022 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
ZC3HC1-206ENST00000471022 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms