RNA–Protein interactions for RNA: ENST00000470263.5

LINC02008-201, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 1 (best) BASIC

Gene LINC02008, Length 1,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-201ENST00000470263 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
LINC02008-201ENST00000470263 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
LINC02008-201ENST00000470263 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
LINC02008-201ENST00000470263 ABCC9O60706 1549 aa13.52□□□□□ -0.25
LINC02008-201ENST00000470263 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
LINC02008-201ENST00000470263 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
LINC02008-201ENST00000470263 RB1CC1Q8TDY2 1594 aa12.95□□□□□ -0.34
LINC02008-201ENST00000470263 NACADO15069 1562 aa12.92□□□□□ -0.34
LINC02008-201ENST00000470263 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.35
LINC02008-201ENST00000470263 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
LINC02008-201ENST00000470263 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
LINC02008-201ENST00000470263 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
LINC02008-201ENST00000470263 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC02008-201ENST00000470263 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
LINC02008-201ENST00000470263 SCRIBQ14160 1630 aa12.54□□□□□ -0.4
LINC02008-201ENST00000470263 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
LINC02008-201ENST00000470263 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
LINC02008-201ENST00000470263 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
LINC02008-201ENST00000470263 CC2D2AQ9P2K1 1620 aa12.21□□□□□ -0.45
LINC02008-201ENST00000470263 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
LINC02008-201ENST00000470263 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
LINC02008-201ENST00000470263 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.5
LINC02008-201ENST00000470263 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
LINC02008-201ENST00000470263 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
LINC02008-201ENST00000470263 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
LINC02008-201ENST00000470263 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
LINC02008-201ENST00000470263 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
LINC02008-201ENST00000470263 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
LINC02008-201ENST00000470263 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
LINC02008-201ENST00000470263 WIZO95785 1651 aa11.76□□□□□ -0.53
LINC02008-201ENST00000470263 RSF1Q96T23 1441 aaPredicted RBP11.74□□□□□ -0.53
LINC02008-201ENST00000470263 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
LINC02008-201ENST00000470263 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
LINC02008-201ENST00000470263 NESP48681 1621 aa11.68□□□□□ -0.54
LINC02008-201ENST00000470263 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
LINC02008-201ENST00000470263 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
LINC02008-201ENST00000470263 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
LINC02008-201ENST00000470263 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
LINC02008-201ENST00000470263 PDS5BQ9NTI5 1447 aa11.56□□□□□ -0.56
LINC02008-201ENST00000470263 CUX2O14529 1486 aa11.53□□□□□ -0.56
LINC02008-201ENST00000470263 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
LINC02008-201ENST00000470263 CFTRP13569 1480 aa11.5□□□□□ -0.57
LINC02008-201ENST00000470263 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
LINC02008-201ENST00000470263 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
LINC02008-201ENST00000470263 FANCD2Q9BXW9 1451 aa11.46□□□□□ -0.58
LINC02008-201ENST00000470263 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
LINC02008-201ENST00000470263 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
LINC02008-201ENST00000470263 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
LINC02008-201ENST00000470263 WDR62O43379 1518 aa11.39□□□□□ -0.59
LINC02008-201ENST00000470263 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
LINC02008-201ENST00000470263 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
LINC02008-201ENST00000470263 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
LINC02008-201ENST00000470263 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
LINC02008-201ENST00000470263 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
LINC02008-201ENST00000470263 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
LINC02008-201ENST00000470263 IFT140Q96RY7 1462 aa11.21□□□□□ -0.62
LINC02008-201ENST00000470263 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
LINC02008-201ENST00000470263 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
LINC02008-201ENST00000470263 CUX1P39880 1505 aa11.16□□□□□ -0.62
LINC02008-201ENST00000470263 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
LINC02008-201ENST00000470263 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
LINC02008-201ENST00000470263 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
LINC02008-201ENST00000470263 SOGA1O94964 1423 aa11.12□□□□□ -0.63
LINC02008-201ENST00000470263 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
LINC02008-201ENST00000470263 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC02008-201ENST00000470263 TDRD9Q8NDG6 1382 aaKnown RBP11.08□□□□□ -0.64
LINC02008-201ENST00000470263 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
LINC02008-201ENST00000470263 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
LINC02008-201ENST00000470263 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
LINC02008-201ENST00000470263 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
LINC02008-201ENST00000470263 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
LINC02008-201ENST00000470263 BIVM-ERCC5R4GMW8 1640 aa11.03□□□□□ -0.64
LINC02008-201ENST00000470263 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
LINC02008-201ENST00000470263 FBLN2P98095 1184 aa11.01□□□□□ -0.65
LINC02008-201ENST00000470263 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
LINC02008-201ENST00000470263 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
LINC02008-201ENST00000470263 SNAPC4Q5SXM2 1469 aa10.99□□□□□ -0.65
LINC02008-201ENST00000470263 CHD1O14646 1710 aa10.98□□□□□ -0.65
LINC02008-201ENST00000470263 MAGI1Q96QZ7 1491 aaPredicted RBP10.97□□□□□ -0.65
LINC02008-201ENST00000470263 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
LINC02008-201ENST00000470263 PBRM1Q86U86 1689 aa10.96□□□□□ -0.66
LINC02008-201ENST00000470263 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.66
LINC02008-201ENST00000470263 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
LINC02008-201ENST00000470263 FOXD1Q16676 465 aa10.93□□□□□ -0.66
LINC02008-201ENST00000470263 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
LINC02008-201ENST00000470263 ERICH3Q5RHP9 1530 aa10.88□□□□□ -0.67
LINC02008-201ENST00000470263 RIMBP3CA6NJZ7 1639 aa10.88□□□□□ -0.67
LINC02008-201ENST00000470263 RIMBP3BA6NNM3 1639 aa10.88□□□□□ -0.67
LINC02008-201ENST00000470263 RIMBP3Q9UFD9 1639 aa10.88□□□□□ -0.67
LINC02008-201ENST00000470263 ARHGEF11O15085 1522 aa10.88□□□□□ -0.67
LINC02008-201ENST00000470263 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
LINC02008-201ENST00000470263 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
LINC02008-201ENST00000470263 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
LINC02008-201ENST00000470263 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
LINC02008-201ENST00000470263 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
LINC02008-201ENST00000470263 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
LINC02008-201ENST00000470263 IGF1RP08069 1367 aa10.81□□□□□ -0.68
LINC02008-201ENST00000470263 NUP160Q12769 1436 aa10.8□□□□□ -0.68
LINC02008-201ENST00000470263 CEP170Q5SW79 1584 aa10.8□□□□□ -0.68
LINC02008-201ENST00000470263 ARAP1Q96P48 1450 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms