RNA–Protein interactions for RNA: ENST00000469510.1

LCOR-207, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

TSL 2

Gene LCOR, Length 468 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-207ENST00000469510 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
LCOR-207ENST00000469510 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
LCOR-207ENST00000469510 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
LCOR-207ENST00000469510 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
LCOR-207ENST00000469510 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
LCOR-207ENST00000469510 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
LCOR-207ENST00000469510 ABCC9O60706 1549 aa21.57■■□□□ 1.04
LCOR-207ENST00000469510 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
LCOR-207ENST00000469510 NACADO15069 1562 aa20.89■□□□□ 0.93
LCOR-207ENST00000469510 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
LCOR-207ENST00000469510 FOXD1Q16676 465 aa20.81■□□□□ 0.92
LCOR-207ENST00000469510 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
LCOR-207ENST00000469510 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
LCOR-207ENST00000469510 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
LCOR-207ENST00000469510 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
LCOR-207ENST00000469510 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
LCOR-207ENST00000469510 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
LCOR-207ENST00000469510 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
LCOR-207ENST00000469510 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
LCOR-207ENST00000469510 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
LCOR-207ENST00000469510 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
LCOR-207ENST00000469510 ADRA2BP18089 450 aa19.71■□□□□ 0.75
LCOR-207ENST00000469510 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
LCOR-207ENST00000469510 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
LCOR-207ENST00000469510 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
LCOR-207ENST00000469510 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
LCOR-207ENST00000469510 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
LCOR-207ENST00000469510 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
LCOR-207ENST00000469510 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
LCOR-207ENST00000469510 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
LCOR-207ENST00000469510 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
LCOR-207ENST00000469510 MSH5O43196 834 aa19.23■□□□□ 0.67
LCOR-207ENST00000469510 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
LCOR-207ENST00000469510 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
LCOR-207ENST00000469510 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
LCOR-207ENST00000469510 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
LCOR-207ENST00000469510 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
LCOR-207ENST00000469510 WIZO95785 1651 aa19.06■□□□□ 0.64
LCOR-207ENST00000469510 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
LCOR-207ENST00000469510 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
LCOR-207ENST00000469510 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
LCOR-207ENST00000469510 NESP48681 1621 aa18.67■□□□□ 0.58
LCOR-207ENST00000469510 ERCC6Q03468 1493 aa18.66■□□□□ 0.58
LCOR-207ENST00000469510 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
LCOR-207ENST00000469510 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
LCOR-207ENST00000469510 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
LCOR-207ENST00000469510 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
LCOR-207ENST00000469510 CFTRP13569 1480 aa18.57■□□□□ 0.56
LCOR-207ENST00000469510 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
LCOR-207ENST00000469510 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
LCOR-207ENST00000469510 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
LCOR-207ENST00000469510 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
LCOR-207ENST00000469510 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
LCOR-207ENST00000469510 CUX2O14529 1486 aa18.44■□□□□ 0.54
LCOR-207ENST00000469510 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
LCOR-207ENST00000469510 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
LCOR-207ENST00000469510 WDR62O43379 1518 aa18.35■□□□□ 0.53
LCOR-207ENST00000469510 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
LCOR-207ENST00000469510 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
LCOR-207ENST00000469510 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
LCOR-207ENST00000469510 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
LCOR-207ENST00000469510 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
LCOR-207ENST00000469510 CUX1P39880 1505 aa18.05■□□□□ 0.48
LCOR-207ENST00000469510 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
LCOR-207ENST00000469510 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
LCOR-207ENST00000469510 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
LCOR-207ENST00000469510 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
LCOR-207ENST00000469510 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
LCOR-207ENST00000469510 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
LCOR-207ENST00000469510 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
LCOR-207ENST00000469510 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
LCOR-207ENST00000469510 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
LCOR-207ENST00000469510 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
LCOR-207ENST00000469510 SOGA1O94964 1423 aa17.92■□□□□ 0.46
LCOR-207ENST00000469510 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
LCOR-207ENST00000469510 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
LCOR-207ENST00000469510 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
LCOR-207ENST00000469510 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
LCOR-207ENST00000469510 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
LCOR-207ENST00000469510 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
LCOR-207ENST00000469510 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
LCOR-207ENST00000469510 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
LCOR-207ENST00000469510 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
LCOR-207ENST00000469510 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
LCOR-207ENST00000469510 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
LCOR-207ENST00000469510 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
LCOR-207ENST00000469510 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
LCOR-207ENST00000469510 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
LCOR-207ENST00000469510 CHD1O14646 1710 aa17.68■□□□□ 0.42
LCOR-207ENST00000469510 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
LCOR-207ENST00000469510 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
LCOR-207ENST00000469510 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
LCOR-207ENST00000469510 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
LCOR-207ENST00000469510 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
LCOR-207ENST00000469510 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
LCOR-207ENST00000469510 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
LCOR-207ENST00000469510 FBLN2P98095 1184 aa17.57■□□□□ 0.4
LCOR-207ENST00000469510 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
LCOR-207ENST00000469510 CUL7Q14999 1698 aa17.57■□□□□ 0.4
LCOR-207ENST00000469510 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms