RNA–Protein interactions for RNA: ENST00000468673.5

NVL-210, Transcript of nuclear VCP-like, humanhuman

TSL 2

Gene NVL, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-210ENST00000468673 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
NVL-210ENST00000468673 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
NVL-210ENST00000468673 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
NVL-210ENST00000468673 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
NVL-210ENST00000468673 ABCC9O60706 1549 aa20.79■□□□□ 0.92
NVL-210ENST00000468673 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
NVL-210ENST00000468673 NACADO15069 1562 aa19.96■□□□□ 0.79
NVL-210ENST00000468673 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
NVL-210ENST00000468673 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
NVL-210ENST00000468673 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
NVL-210ENST00000468673 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
NVL-210ENST00000468673 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
NVL-210ENST00000468673 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
NVL-210ENST00000468673 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
NVL-210ENST00000468673 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
NVL-210ENST00000468673 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
NVL-210ENST00000468673 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
NVL-210ENST00000468673 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
NVL-210ENST00000468673 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
NVL-210ENST00000468673 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
NVL-210ENST00000468673 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
NVL-210ENST00000468673 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
NVL-210ENST00000468673 SMARCA4P51532 1647 aa18.47■□□□□ 0.55
NVL-210ENST00000468673 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
NVL-210ENST00000468673 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
NVL-210ENST00000468673 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
NVL-210ENST00000468673 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
NVL-210ENST00000468673 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
NVL-210ENST00000468673 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
NVL-210ENST00000468673 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
NVL-210ENST00000468673 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
NVL-210ENST00000468673 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
NVL-210ENST00000468673 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
NVL-210ENST00000468673 WIZO95785 1651 aa18.09■□□□□ 0.49
NVL-210ENST00000468673 NESP48681 1621 aa17.96■□□□□ 0.47
NVL-210ENST00000468673 TOP2AP11388 1531 aaKnown RBP17.94■□□□□ 0.46
NVL-210ENST00000468673 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
NVL-210ENST00000468673 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
NVL-210ENST00000468673 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
NVL-210ENST00000468673 KCNA4P22459 653 aa17.9■□□□□ 0.46
NVL-210ENST00000468673 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
NVL-210ENST00000468673 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
NVL-210ENST00000468673 CUX2O14529 1486 aa17.82■□□□□ 0.44
NVL-210ENST00000468673 CFTRP13569 1480 aa17.77■□□□□ 0.44
NVL-210ENST00000468673 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
NVL-210ENST00000468673 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
NVL-210ENST00000468673 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
NVL-210ENST00000468673 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
NVL-210ENST00000468673 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
NVL-210ENST00000468673 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
NVL-210ENST00000468673 WDR62O43379 1518 aa17.6■□□□□ 0.41
NVL-210ENST00000468673 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
NVL-210ENST00000468673 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
NVL-210ENST00000468673 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
NVL-210ENST00000468673 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
NVL-210ENST00000468673 ADRA2BP18089 450 aa17.51■□□□□ 0.39
NVL-210ENST00000468673 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
NVL-210ENST00000468673 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
NVL-210ENST00000468673 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
NVL-210ENST00000468673 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
NVL-210ENST00000468673 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
NVL-210ENST00000468673 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
NVL-210ENST00000468673 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
NVL-210ENST00000468673 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
NVL-210ENST00000468673 CUX1P39880 1505 aa17.2■□□□□ 0.34
NVL-210ENST00000468673 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
NVL-210ENST00000468673 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
NVL-210ENST00000468673 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
NVL-210ENST00000468673 SOGA1O94964 1423 aa17.14■□□□□ 0.33
NVL-210ENST00000468673 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
NVL-210ENST00000468673 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
NVL-210ENST00000468673 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.334e-10■■■■■ 38.9
NVL-210ENST00000468673 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
NVL-210ENST00000468673 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
NVL-210ENST00000468673 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
NVL-210ENST00000468673 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
NVL-210ENST00000468673 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
NVL-210ENST00000468673 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
NVL-210ENST00000468673 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.31
NVL-210ENST00000468673 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
NVL-210ENST00000468673 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
NVL-210ENST00000468673 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
NVL-210ENST00000468673 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
NVL-210ENST00000468673 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
NVL-210ENST00000468673 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
NVL-210ENST00000468673 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
NVL-210ENST00000468673 FBLN2P98095 1184 aa16.88■□□□□ 0.29
NVL-210ENST00000468673 CHD1O14646 1710 aa16.87■□□□□ 0.29
NVL-210ENST00000468673 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
NVL-210ENST00000468673 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
NVL-210ENST00000468673 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
NVL-210ENST00000468673 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
NVL-210ENST00000468673 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
NVL-210ENST00000468673 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
NVL-210ENST00000468673 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
NVL-210ENST00000468673 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
NVL-210ENST00000468673 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
NVL-210ENST00000468673 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
NVL-210ENST00000468673 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
NVL-210ENST00000468673 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms