RNA–Protein interactions for RNA: ENST00000468447.1

MKRN1-205, Transcript of makorin ring finger protein 1, humanhuman

TSL 1 (best)

Gene MKRN1, Length 583 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-205ENST00000468447 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
MKRN1-205ENST00000468447 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
MKRN1-205ENST00000468447 ABCC9O60706 1549 aa19.14■□□□□ 0.65
MKRN1-205ENST00000468447 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
MKRN1-205ENST00000468447 NACADO15069 1562 aa18.38■□□□□ 0.53
MKRN1-205ENST00000468447 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
MKRN1-205ENST00000468447 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
MKRN1-205ENST00000468447 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
MKRN1-205ENST00000468447 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
MKRN1-205ENST00000468447 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
MKRN1-205ENST00000468447 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
MKRN1-205ENST00000468447 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
MKRN1-205ENST00000468447 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
MKRN1-205ENST00000468447 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
MKRN1-205ENST00000468447 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
MKRN1-205ENST00000468447 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
MKRN1-205ENST00000468447 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
MKRN1-205ENST00000468447 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
MKRN1-205ENST00000468447 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
MKRN1-205ENST00000468447 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
MKRN1-205ENST00000468447 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
MKRN1-205ENST00000468447 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
MKRN1-205ENST00000468447 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
MKRN1-205ENST00000468447 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
MKRN1-205ENST00000468447 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
MKRN1-205ENST00000468447 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
MKRN1-205ENST00000468447 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
MKRN1-205ENST00000468447 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
MKRN1-205ENST00000468447 WIZO95785 1651 aa16.66■□□□□ 0.26
MKRN1-205ENST00000468447 NESP48681 1621 aa16.55■□□□□ 0.24
MKRN1-205ENST00000468447 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
MKRN1-205ENST00000468447 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
MKRN1-205ENST00000468447 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
MKRN1-205ENST00000468447 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
MKRN1-205ENST00000468447 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
MKRN1-205ENST00000468447 CUX2O14529 1486 aa16.45■□□□□ 0.22
MKRN1-205ENST00000468447 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
MKRN1-205ENST00000468447 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
MKRN1-205ENST00000468447 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
MKRN1-205ENST00000468447 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
MKRN1-205ENST00000468447 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
MKRN1-205ENST00000468447 CFTRP13569 1480 aa16.32■□□□□ 0.2
MKRN1-205ENST00000468447 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
MKRN1-205ENST00000468447 WDR62O43379 1518 aa16.25■□□□□ 0.19
MKRN1-205ENST00000468447 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
MKRN1-205ENST00000468447 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
MKRN1-205ENST00000468447 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
MKRN1-205ENST00000468447 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
MKRN1-205ENST00000468447 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
MKRN1-205ENST00000468447 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
MKRN1-205ENST00000468447 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
MKRN1-205ENST00000468447 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
MKRN1-205ENST00000468447 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
MKRN1-205ENST00000468447 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
MKRN1-205ENST00000468447 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
MKRN1-205ENST00000468447 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
MKRN1-205ENST00000468447 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
MKRN1-205ENST00000468447 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
MKRN1-205ENST00000468447 CUX1P39880 1505 aa15.82■□□□□ 0.12
MKRN1-205ENST00000468447 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
MKRN1-205ENST00000468447 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
MKRN1-205ENST00000468447 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
MKRN1-205ENST00000468447 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
MKRN1-205ENST00000468447 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
MKRN1-205ENST00000468447 SOGA1O94964 1423 aa15.68■□□□□ 0.1
MKRN1-205ENST00000468447 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.14e-7■■■□□ 19.1
MKRN1-205ENST00000468447 CHD1O14646 1710 aa15.66■□□□□ 0.1
MKRN1-205ENST00000468447 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
MKRN1-205ENST00000468447 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
MKRN1-205ENST00000468447 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
MKRN1-205ENST00000468447 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
MKRN1-205ENST00000468447 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
MKRN1-205ENST00000468447 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
MKRN1-205ENST00000468447 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
MKRN1-205ENST00000468447 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
MKRN1-205ENST00000468447 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
MKRN1-205ENST00000468447 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
MKRN1-205ENST00000468447 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
MKRN1-205ENST00000468447 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
MKRN1-205ENST00000468447 RIMBP3CA6NJZ7 1639 aa15.52■□□□□ 0.08
MKRN1-205ENST00000468447 RIMBP3BA6NNM3 1639 aa15.52■□□□□ 0.08
MKRN1-205ENST00000468447 RIMBP3Q9UFD9 1639 aa15.52■□□□□ 0.08
MKRN1-205ENST00000468447 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
MKRN1-205ENST00000468447 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
MKRN1-205ENST00000468447 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
MKRN1-205ENST00000468447 ADAMTS12P58397 1594 aa15.47■□□□□ 0.07
MKRN1-205ENST00000468447 EEA1Q15075 1411 aa15.44■□□□□ 0.06
MKRN1-205ENST00000468447 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
MKRN1-205ENST00000468447 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
MKRN1-205ENST00000468447 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
MKRN1-205ENST00000468447 FBLN2P98095 1184 aa15.37■□□□□ 0.05
MKRN1-205ENST00000468447 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
MKRN1-205ENST00000468447 FHAD1B1AJZ9 1412 aa15.35■□□□□ 0.05
MKRN1-205ENST00000468447 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
MKRN1-205ENST00000468447 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
MKRN1-205ENST00000468447 NUP160Q12769 1436 aa15.34■□□□□ 0.05
MKRN1-205ENST00000468447 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
MKRN1-205ENST00000468447 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
MKRN1-205ENST00000468447 IGF1RP08069 1367 aa15.3■□□□□ 0.04
MKRN1-205ENST00000468447 CUL7Q14999 1698 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms